Return to main results Retrieve Phyre Job Id

Job DescriptionQ9JMS7
Confidence13.94%DateThu Jan 5 12:38:03 GMT 2012
Rank11Aligned Residues49
% Identity27%Templatec2y0fD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: structure of gcpe (ispg) from thermus thermophilus hb27
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130.........140.........150.........160.........170....... .. 180.......
Predicted Secondary structure 







.......




Query SS confidence 















































. . . . .

. .







Query Sequence  TYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGSID. . . . . GI. . FVGETGDK
Query Conservation   
   

 


 


 

 








 







 
        
.....
 ..
   
   
Alig confidence 





























.........








.....

..







Template Conservation    
   
      
   
 

  






.........







  


 

  
 

   
Template Sequence  EEVSRRLKERLPEWRARYPGVEELKVAVMG. . . . . . . . . CVVNGPGESKHAHIGISLPGAGEEPK
Template Known Secondary structure 
TTGGG
S.........
TTTTGGGGTT
S


TT

S
Template Predicted Secondary structure 





.........






















Template SS confidence 
































































   313......320.........330.........340.. .......350.........360........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions