|   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | S | V | S | S | V | H | T | L | T | D | D | L | P | L | E | S | L | A | D | . |
. |
. |
. |
. |
. |
Q | P | G | A | G | N | V | H | L | L | I | P | P | E | G | L | L | Y | R | S | L | T | L | P | N | A | K | Y | K | L | T | A | Q | T | L | Q | W | L | A | E | E | T | L | P | D | N | T | Q | D | W | H | W | T |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |
|   |   |   |   |   |
|   |   |
|   |   | . | . | . | . | . | . |   |
|   |   |   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |   |
|   |   |   |   |
|
|
|   |   |
|
|
|   |
|
|   |
|
|
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | P | G | L | L | X | E | G | X | V | A | E | P | A | A | L | A | Q | E | I | K | E | L | L | L | E | A | R | T | R | K | R | Y | V | V | T | A | L | S | N | L | A | V | I | L | R | P | I | Q | V | P | K | X | P | L | K | E | X | E | E | A | V | R | W | E | A | E | R | Y | I | P | F | P | I | E | V | V | L | D | F |
Template Known Secondary structure |   |
| T | T | S |  |  | T | T |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|  |  |  |  |  |  |
| G | G | G |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
| S | S |
|
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
  |
  |   |
99 | |
|
|
|
|
|
|
|
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
Predicted Secondary structure |   |
 | . | . | . | . | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |
|
|
Query SS confidence |   |
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | . |
. |
. |
. |
. |
. |
. |
. |
V | D | K | Q | N | E | S | V | E | V | I | G | I | Q | S | E | K | L | S | R | Y | L | E | R | L | H | T | A | G | L | N | V | T | R | V | L | P | D | G | C | Y | L |
Query Conservation |   |
  | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |
|   |
|
|   |
|   |
|
Alig confidence |   |
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |
Template Sequence |   |
A | P | L | T | P | L | S | E | V | Q | E | G | E | Q | V | Q | V | X | V | A | A | A | R | Q | E | A | V | A | G | V | L | E | A | L | R | G | A | G | L | V | P | V | V | L | D | V | K | P | F | A | G |
Template Known Secondary structure |   |
 |  | S | S |
| G | G | G | S |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
127 | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
  |