Job Description P45763 Confidence 100.00% Date Thu Jan 5 12:03:40 GMT 2012 Rank 1 Aligned Residues 229 % Identity 22% Template c1yf5L_ PDB info PDB header:transport protein Chain: L: PDB Molecule:general secretion pathway protein l; PDBTitle: cyto-epsl: the cytoplasmic domain of epsl, an inner membrane component2 of the type ii secretion system of vibrio cholerae Resolution 2.75 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		E	S	L	M	V	I	R	S	S	S	T	L	R	K	H	W	E	W	M	T	F	S	A	.	.	D	S	V	S	S	V	H	T	L	T	D	D	L	P	L	E	S	L	A	D	Q	P	G	A	G	N	V	H	L	L	I	P	P	E	G	L	L	Y	R	S	L	T	L	P	N	A	K	Y	K	L	T	A	Q	T	L
Query Conservation																									.	.
Alig confidence																									.	.
Template Conservation
Template Sequence		S	E	F	L	T	V	R	L	S	S	Q	K	E	A	D	I	P	W	L	V	W	S	A	E	Q	Q	E	V	I	A	S	G	Q	V	A	G	W	E	A	L	H	E	I	E	S	Y	A	D	Q	R	S	V	V	V	L	L	A	A	S	D	L	I	L	T	S	V	E	I	P	P	G	A	S	R	Q	L	E	N	X	L
Template Known Secondary structure											S		T	T	S									T	T	T	T										S	G	G	G	G	G	G	G					T	T	S								G	G	G	S									T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	W	L	A	E	E	T	L	P	D	N	T	Q	D	W	H	W	T	V	V	D	K	Q	N	E	S	V	E	V	I	G	I	Q	S	E	K	L	S	R	Y	L	E	R	L	H	T	A	G	L	N	V	T	R	V	L	P	D	G	C	Y	L	P	W	E	V	D	S	W	T	L	V	N	Q	Q	T	S	W	L	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	Y	L	L	E	D	E	I	A	Q	D	V	E	D	V	H	F	C	V	L	S	K	G	R	E	T	A	D	V	V	G	V	D	R	L	W	L	R	A	C	L	D	H	L	K	A	C	G	F	D	V	K	R	V	L	P	D	V	L	A	I	P	R	P	E	H	G	L	A	A	L	Q	L	G	D	E	W	L	V	R
Template Known Secondary structure					T	G	G	G		S	S		G	G	G										S	S																						T	T									G	G	G	G	S				S	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																											.	.	.	.	.	.																.
Query SS confidence																											.	.	.	.	.	.																.
Query Sequence		S	A	A	H	A	F	N	E	L	D	E	H	W	L	Q	H	L	A	A	Q	F	P	P	E	N	.	.	.	.	.	.	M	L	C	Y	G	V	V	P	H	G	V	A	A	A	N	.	P	L	I	Q	H	P	E	I	P	S	L	S	L	Y	S	A	D	I	A	F	Q	R	Y	D	M	L	H	G	I	F	R
Query Conservation																											.	.	.	.	.	.																.
Alig confidence																											.	.	.	.	.	.																.
Template Conservation
Template Sequence		K	S	T	T	Q	G	X	A	V	D	A	Q	W	L	S	L	L	A	A	S	D	W	V	Q	N	E	G	E	Y	L	P	L	Q	A	L	T	P	L	P	E	L	S	L	A	E	T	Q	E	W	R	Y	E	P	S	G	L	V	X	Q	L	L	T	Q	E	A	L	T	S	K	F	N	L	L	T	G	S	F	K
Template Known Secondary structure			S	S	S							G	G	G							S	G	G	G			T	T								S	S									T	T					B				S																	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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