Job Description P0AG71 Confidence 14.82% Date Thu Jan 5 11:28:16 GMT 2012 Rank 63 Aligned Residues 117 % Identity 9% Template c3tnfB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:lida; PDBTitle: lida from legionella in complex with active rab8a Resolution 2.50 Å

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		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	Y	E	H	Q	S	R	N	A	Q	Q	I	A	D	R	A	S	K	L	Y	D	K	M	R	L	F	I	D	D	M	S	A	I	G	Q	S	L	D	K	A	Q	D	N	Y	R	Q	A	M	K	K	L	S	S	G	R	G	N	V	L	A	Q	A	E	A	F	R	G	L	G	V	E	I	K	R	E	I	N	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	Y	E	Q	A	I	K	R	A	Q	E	N	I	K	K	G	E	E	L	E	K	K	L	D	K	L	E	R	Q	G	K	D	L	E	D	K	Y	K	T	Y	E	E	N	L	E	G	F	E	K	L	L	T	D	S	E	E	L	S	L	S	E	I	N	E	K	M	E	A	F	S	K	D	S	E	K	L	T	Q	L
Template Known Secondary structure													T	T	T	T	T	T	T						T	T																						T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	Q	A	V	S	Q	D	E	E	Y	R	L	R	S	V	P	E	Q	P	N	D	E	A	Y	Q	R	D	D	E	Y	N	Q	Q	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	E	K	H	K	G	D	E	K	T	V	Q	S	L	Q	R	E	H	H	D	I	K	A	K	L	A	N	L	Q	V	L	H	D	A	H	T	G
Template Known Secondary structure			T	T	S	T	T																														S
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions