Job Description P0A9I1 Confidence 99.41% Date Thu Jan 5 11:10:18 GMT 2012 Rank 31 Aligned Residues 224 % Identity 17% Template d1kbla1 SCOP info TIM beta/alpha-barrel Phosphoenolpyruvate/pyruvate domain Pyruvate phosphate dikinase, C-terminal domain Resolution 1.94

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.																					.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.
Predicted Secondary structure																								.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence																								.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		L	F	V	P	G	A	N	A	A	M	V	S	N	S	F	I	Y	P	A	D	A	L	.	M	F	D	L	E	D	S	V	A	L	R	E	K	D	T	A	R	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	H	A	L	Q	H	P	L	Y	R	.	.	D	I	E	T	I
Query Conservation																								.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence																								.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		V	R	T	N	A	D	T	P	E	D	T	L	N	A	V	K	L	G	A	E	G	I	G	L	C	R	T	E	H	M	F	F	E	A	D	R	I	M	K	I	R	K	M	I	L	S	D	S	V	E	A	R	E	E	A	L	N	E	L	I	P	F	Q	K	G	D	F	K	A	M	Y	K	A	L	E	G	R	P	M	T
Template Known Secondary structure								S										T	T			S							T					S															S										T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
		75	.	.	.	.	80	.	.	.																																																				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query Sequence		V	R	V	N	A	L	D	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	G	V	N	D	L	E	A	V	V	R	G	G	A	D	V	.	.	.	.
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation
Template Sequence		V	R	Y	L	D	P	P	L	H	E	F	V	P	H	T	E	E	E	Q	A	E	L	A	K	N	M	G	L	T	L	A	E	V	K	A	K	V	D	E	L	H	E	F	N	P	M	M	G	H	R	G	C	R	L	A	V	T	Y	P	E	I	A	K	M	Q	T	R	A	V	M	E	A	A	I	E	V	K	E	E	T
Template Known Secondary structure							S		G	G	G	G	S			S												T																S		G	G	G	S	S		T
Template Predicted Secondary structure
Template SS confidence
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.
									100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																											.	.	.
Query SS confidence		.	.	.	.	.	.	.																											.	.	.
Query Sequence		.	.	.	.	.	.	.	V	R	L	P	K	T	D	T	A	Q	D	V	L	D	I	E	K	E	I	L	R	I	E	K	A	C	.	.	.	G	R	E	P	G	S	T	G	L	L	A	A	I	E	S	P	L	G	I	T	R	A	V	E	I	A	H	A	S	E	R	L	I	G	I	A	L	G	A	E	D	Y	V	R
Query Conservation		.	.	.	.	.	.	.																											.	.	.
Alig confidence		.	.	.	.	.	.	.																											.	.	.																													.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		G	I	D	I	V	P	E	I	M	I	P	L	V	G	E	K	K	E	L	K	F	V	K	D	V	V	V	E	V	A	E	Q	V	K	K	E	K	G	S	D	M	Q	Y	H	I	G	T	M	I	E	I	P	R	A	A	L	T	A	D	A	I	A	E	E	.	.	.	A	E	F	F	S	F	G	T	N	D	L	T	Q
Template Known Secondary structure													S			S																							T													S						T					T	T	T	.	.	.		S
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		696	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.				760	.	.	.	.	.	.	.	.	.	770	.	.
			170	.	.	.	.	.																							.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence		.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		.	N	L	R	T	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	E	G	T	E	L	L	F	A	R	C	S	I	L	Q	A	A	R	S	A	.	.	G	I	Q	A	F	D	T	V	Y	S	D	A	N	N	E	A	G	F	L	Q	E	A	A	H	I	K	Q	L
Query Conservation		.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence		.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.					.	.													.	.	.
Template Conservation																																																										.	.													.	.	.
Template Sequence		M	T	F	G	F	S	R	D	D	A	G	K	F	L	D	S	Y	Y	K	A	K	I	Y	E	S	D	P	F	A	R	L	D	Q	T	G	V	G	Q	L	V	E	M	A	V	K	K	G	R	Q	T	R	P	G	L	K	C	.	.	G	I	C	G	E	H	G	G	D	P	S	S	.	.	.	V	E	F	C	H	K	V
Template Known Secondary structure					T																T	T	S		S	S		T	T	T	S			T	T	T																	T	T				.	.				S	G	G	G	G	S				.	.	.							T
Template Predicted Secondary structure																																																										.	.													.	.	.
Template SS confidence
		773	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.			.	830	.	.	.	.	.	.	.	.	.	840				.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	D	G	K	S	L	I	N	P	R	Q	I	D	L	L	H	N	L	Y	A	P	T	Q	K	E	V	D	H	A	R	R	V	V	E
Query Conservation
Alig confidence					.														.	.	.	.	.	.	.	.	.
Template Conservation					.														.	.	.	.	.	.	.	.	.
Template Sequence		G	L	N	.	Y	V	S	C	S	P	F	R	V	P	I	A	R	.	.	.	.	.	.	.	.	.	L	A	A	A	Q	A	A	L	N
Template Known Secondary structure		T		S	.						G	G	G						.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.														.	.	.	.	.	.	.	.	.
Template SS confidence
		848	.	850		.	.	.	.	.	.	.	.	.	860	.	.	.										.	.	.	.	.	.	870	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions