Job Description P0A9I1 Confidence 99.53% Date Thu Jan 5 11:10:18 GMT 2012 Rank 24 Aligned Residues 232 % Identity 15% Template d1h6za1 SCOP info TIM beta/alpha-barrel Phosphoenolpyruvate/pyruvate domain Pyruvate phosphate dikinase, C-terminal domain Resolution 3.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.																					.	60	.	.	.	.	.	.	.	.	.			70
Predicted Secondary structure																												.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence																												.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		R	R	S	M	L	F	V	P	G	A	N	A	A	M	V	S	N	S	F	I	Y	P	A	D	A	L	.	M	F	D	L	E	D	S	V	A	L	R	E	K	D	T	A	R	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	H	A	L	Q	H	P	L	Y	R	.	.	D
Query Conservation																												.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence																												.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		K	R	L	G	V	R	T	N	A	D	T	P	A	D	A	A	K	A	R	S	F	G	A	E	G	V	G	L	C	R	T	E	H	M	F	F	E	G	S	R	I	N	F	I	R	E	M	I	L	A	D	S	A	S	G	R	K	A	A	L	D	K	L	L	P	I	Q	R	A	D	F	V	G	I	L	R	A	M	R	G
Template Known Secondary structure				S							S	S									T	T	T			S					B		S	G	G	G	S	T	T	T										S		S	S																								T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.																																																				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	E	T	I	V	R	V	N	A	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	W	G	V	N	D	L	E	A	V	V	R	G	G	A	D	V
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	V	T	I	R	L	L	D	P	P	L	H	E	F	V	P	H	D	A	A	A	Q	F	E	L	A	Q	K	L	G	M	P	A	E	K	V	R	N	R	V	N	A	L	H	E	L	N	P	M	L	G	H	R	G	C	R	L	G	I	T	Y	P	E	I	Y	N	M	Q	V	R	A	I	I	E	A	A	I	A	V
Template Known Secondary structure		S									S		G	G	G	G			S	S		S	S	T	T	T	T	S		S	S	S												S	S			S	S	S	T	T	S	S									S	T	T
Template Predicted Secondary structure
Template SS confidence
		637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.
												100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																											.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																											.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	V	R	L	P	K	T	D	T	A	Q	D	V	L	D	I	E	K	E	I	L	R	I	E	K	A	C	.	.	.	G	R	E	P	G	S	T	G	L	L	A	A	I	E	S	P	L	G	I	T	R	A	V	E	I	A	H	A	S	E	R	L	I	G	I	A	L	G	A	E	D
Query Conservation		.	.	.	.	.	.	.	.	.	.																											.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																											.	.	.																													.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		S	E	E	G	S	S	V	I	P	E	I	M	V	P	L	V	G	K	K	E	E	L	S	L	I	R	E	E	V	V	K	T	A	E	A	V	I	T	K	S	G	K	R	V	H	Y	T	V	G	T	M	I	E	V	P	R	A	A	V	T	A	D	S	I	A	Q	K	.	.	.	A	D	F	F	S	F	G	T	N	D
Template Known Secondary structure			T	T	T														S																						S		S												S						T					T	T	T	.	.	.		S						T	T
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		717	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.				.	.	.	.	.	.	790	.	.	.
		167	.	.		170	.	.	.	.	.																							.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure					.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence					.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		Y	V	R	.	N	L	R	T	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	E	G	T	E	L	L	F	A	R	C	S	I	L	Q	A	A	R	S	A	.	.	G	I	Q	A	F	D	T	V	Y	S	D	A	N	N	E	A	G	F	L	Q	E	A	A	H	I
Query Conservation					.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence					.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.					.	.													.	.	.
Template Conservation																																																													.	.													.	.	.
Template Sequence		L	T	Q	M	G	C	G	F	S	R	D	D	A	G	P	F	L	R	H	Y	G	N	L	G	I	Y	A	Q	D	P	F	Q	S	I	D	Q	E	G	I	G	E	L	V	R	I	A	V	T	K	G	R	R	V	K	P	M	L	K	M	.	.	G	I	C	G	E	H	G	G	D	P	A	T	.	.	.	I	G	F	C
Template Known Secondary structure								T			G	G	G						T	T	T	T	T	T		S	S	S	S		T	T	T	S			T	T	T																S	T	T				.	.				S	G	G	G	G					.	.	.
Template Predicted Secondary structure																																																													.	.													.	.	.
Template SS confidence
		794	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.			.	.	.	.	.	.	.	860	.	.	.	.				.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	L	G	F	D	G	K	S	L	I	N	P	R	Q	I	D	L	L	H	N	L	Y	A	P	T	Q	K	E	V	D	H	A	R	R
Query Conservation
Alig confidence								.														.	.
Template Conservation								.														.	.
Template Sequence		H	K	V	G	L	D	.	Y	V	S	C	S	P	F	R	V	P	V	A	I	.	.	V	A	A	A	H	A	S	I	K	D	R	R	A
Template Known Secondary structure					T		S	.						G	G	G						.	.
Template Predicted Secondary structure								.														.	.
Template SS confidence
		869	870	.	.	.	.		.	.	.	.	.	880	.	.	.	.	.	.	.			.	.	890	.	.	.	.	.	.	.	.	.	900

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions