Job Description P0A9I1 Confidence 91.74% Date Thu Jan 5 11:10:18 GMT 2012 Rank 60 Aligned Residues 141 % Identity 18% Template c3thaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. Resolution 2.37 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.							.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																					.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																	.								.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.								.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	L	Q	Q	R	K	T	R	T	R	R	S	M	L	.	F	V	P	G	A	N	A	.	.	.	.	.	.	A	M	V	S	N	S	F	I	Y	P	A	D	A	L	M	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	D	S	V	A	L	R	E	K	D	T	A	R
Query Conservation																	.								.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.								.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		A	X	V	D	F	R	K	F	Y	K	E	N	A	N	V	A	Y	T	V	L	G	Y	P	N	L	Q	T	S	E	A	F	L	Q	R	L	D	Q	S	P	I	D	I	L	E	L	G	V	A	Y	S	D	P	I	A	D	G	E	I	I	A	D	A	A	K	I	A	L	D	Q	G	V	D	I	H	S	.	.	.	.	.
Template Known Secondary structure						G	G	G	S		S	S	S								T	T	S	S											T	G	G	G	S	S		S								S	S					S	S													T	T						.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		R	M	V	Y	H	A	L	Q	H	P	L	Y	R	D	I	.	E	T	I	V	R	V	N	A	L	D	S	E	W	G	V	N	D	L	E	A	V	V	R	G	G	A	D	V	V	R	L	P	K	T	D	T	A	Q	D	V	L	D	I	E	K	E	I	L	R	I	E	K	A	C	G	R	E	P	G	S	T	G	L	L
Query Conservation																	.
Alig confidence		.	.														.																																			.																.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																																	.																.	.	.	.	.	.	.	.	.
Template Sequence		.	.	V	F	E	L	L	A	R	I	K	T	K	K	A	L	V	F	X	V	Y	Y	N	L	I	F	S	Y	G	L	E	K	F	V	K	K	A	K	S	L	G	I	C	A	L	I	V	P	E	L	.	S	F	E	E	S	D	D	L	I	K	E	C	E	R	Y	.	.	.	.	.	.	.	.	.	N	I	A	L	I
Template Known Secondary structure		.	.							T				S	S																										T	T							T	T		.		G	G	G												.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure		.	.																																																	.																.	.	.	.	.	.	.	.	.
Template SS confidence
				75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.										.	.	140	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	I	E	S	P	L	G	I	T	R	A	V	E	I	A	H	A	S	E	R	L	I	G	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	V	S	V	T	T	P	K	E	R	V	K	K	L	V	K	H	A	K	G	F	I	Y	L	L
Template Known Secondary structure						T	T	S										T	T			S
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions