Job Description P0A9I1 Confidence 100.00% Date Thu Jan 5 11:10:18 GMT 2012 Rank 3 Aligned Residues 266 % Identity 18% Template c3qqwC_ PDB info PDB header:lyase Chain: C: PDB Molecule:putative citrate lyase; PDBTitle: crystal structure of a hypothetical lyase (reut_b4148) from ralstonia2 eutropha jmp134 at 2.44 a resolution Resolution 2.44 Å

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		12	.	.	.	.	.	.	.	20	.						.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure												.	.	.	.	.																	.	.	.	.	.
Query SS confidence												.	.	.	.	.																	.	.	.	.	.
Query Sequence		R	T	R	R	S	M	L	F	V	P	.	.	.	.	.	G	A	N	A	A	M	V	S	N	S	F	I	Y	P	A	D	.	.	.	.	.	A	L	M	F	D	L	E	D	S	V	A	L	R	E	K	D	T	A	R	R	M	V	Y	H	A	L	Q	H	P	L	Y	R	D	I	E	T	I	V	R	V	N	A	L	D
Query Conservation												.	.	.	.	.																	.	.	.	.	.
Alig confidence												.	.	.	.	.																	.	.	.	.	.
Template Conservation
Template Sequence		A	G	E	K	S	F	P	V	L	A	A	C	E	H	F	A	G	S	E	K	L	I	G	K	A	X	D	L	Q	V	E	Y	G	P	V	F	D	V	T	C	D	C	E	D	G	A	A	A	G	Q	E	R	E	H	A	E	X	V	A	R	X	I	A	S	D	R	N	V	H	G	R	A	G	A	R	I	H	D	P	S
Template Known Secondary structure			S	S								S							S																S	S							S	T	T	T	S		T	T															S	T	T			S										T	T
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		82	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		S	E	W	G	V	N	D	L	E	A	V	V	.	.	.	R	G	G	A	D	V	V	R	L	P	K	T	D	T	A	Q	D	V	L	D	I	E	K	E	I	L	R	I	E	K	A	C	G	R	E	P	G	S	T	G	L	L	A	A	I	E	S	P	L	G	I	T	R	A	V	E	I	A	H	A	S	E	R	L	I
Query Conservation														.	.	.
Alig confidence														.	.	.																																				.																							.
Template Conservation																																																				.																							.
Template Sequence		H	P	A	W	R	Q	D	V	D	I	I	V	N	G	A	G	G	R	L	A	Y	I	T	V	P	K	A	T	N	S	G	Q	V	A	E	V	I	R	Y	I	G	D	V	A	K	R	A	G	L	D	.	K	P	V	P	V	H	V	L	I	E	T	H	G	A	L	R	D	V	F	Q	I	A	.	E	L	P	N	I	E
Template Known Secondary structure		S	T	T												S	T	T												S																		T	T		S	.	S										S						T					T	.	T	S	T	T
Template Predicted Secondary structure																																																				.																							.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.										180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																																											.
Query SS confidence																							.	.	.	.	.	.	.	.	.																																											.
Query Sequence		G	I	A	L	G	A	E	D	Y	V	R	N	L	R	T	E	R	S	P	E	G	.	.	.	.	.	.	.	.	.	T	E	L	L	F	A	R	C	S	I	L	Q	A	A	R	S	A	G	I	Q	A	F	D	T	V	Y	S	D	A	N	N	E	A	G	F	L	Q	E	A	A	H	I	.	K	Q	L	G	F	D	G
Query Conservation																							.	.	.	.	.	.	.	.	.																																											.
Alig confidence																							.	.	.	.	.	.	.	.	.																																											.
Template Conservation
Template Sequence		V	L	D	F	G	L	X	D	F	V	S	G	H	H	G	A	I	P	A	A	A	X	R	S	P	G	Q	F	E	H	A	L	L	V	R	A	K	A	D	X	V	A	A	A	L	A	N	G	I	V	P	A	H	N	V	C	L	N	L	K	D	A	E	V	I	A	S	D	A	C	R	A	R	N	E	F	G	F	L	R
Template Known Secondary structure													T	T	T	T		S		G	G	G	G	S	T	T	G	G	G	T	S																	T	T									S		S	S																T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	L	I	N	P	R	Q	I	D	L	L	H	N	L	Y	A	P	T	Q	K	E	V	D	H	A	R	R	V	V	E	A	A	E	A	A	A	R	E	G	L	G	V	V	S	L	N	G	K	M	V	D	G	P	V	I	D	R	A	R	L	V	L	S	R	A	E	L	S	G	I	R
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	W	S	I	Y	P	A	Q	I	Q	P	I	V	N	A	X	R	P	D	F	T	E	V	E	D	A	A	G	I	L	V	A	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	Y	F	W	E	V	L	Q	K	A	K	V	T	G	X	A
Template Known Secondary structure					S	S	G	G	G									S																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.																						.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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