Job Description P0A9I1 Confidence 100.00% Date Thu Jan 5 11:10:18 GMT 2012 Rank 5 Aligned Residues 207 % Identity 33% Template c3qllB_ PDB info PDB header:lyase Chain: B: PDB Molecule:citrate lyase; PDBTitle: crystal structure of ripc from yersinia pestis Resolution 2.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	M	L	F	V	P	G	A	N	A	A	M	V	S	N	S	F	I	Y	P	A	D	A	L	M	F	D	L	E	D	S	V	A	L	R	E	K	D	T	A	R	R	M	V	Y	H	A	L	Q	H	P	L	Y	R	D	I	E	T	I	V	R	V	N	A	L	D	S	E	W	G	V	N	D	L	E	A	V	V	R
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Sequence		R	S	W	L	F	T	P	A	T	R	.	.	.	.	.	.	.	.	.	.	G	A	D	V	A	I	I	D	L	E	D	S	V	S	Q	A	D	K	E	Q	A	R	Q	K	A	I	S	L	.	.	.	.	.	.	.	.	.	P	L	A	L	R	I	N	G	L	D	T	R	A	G	I	E	D	I	H	A	L	L	E
Template Known Secondary structure									S			.	.	.	.	.	.	.	.	.	.			S							S	T	T	S		G	G	G												.	.	.	.	.	.	.	.	.									T	T	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.											20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.										.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		95	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		G	G	.	.	A	D	V	V	R	L	P	K	T	D	T	A	Q	D	V	L	D	I	E	K	E	I	L	R	I	E	K	A	C	G	R	E	P	G	S	T	G	L	L	A	A	I	E	S	P	L	G	I	T	R	A	V	E	I	A	H	A	S	E	R	L	I	G	I	A	L	G	A	E	D	Y	V	R	N	L	R
Query Conservation				.	.
Alig confidence				.	.																								.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.
Template Sequence		C	G	S	L	P	D	Y	L	V	L	P	K	T	E	S	A	A	H	L	Q	I	L	D	R	L	X	X	.	.	.	.	.	.	.	.	.	F	A	D	T	R	L	I	G	I	I	E	S	V	R	G	L	N	A	V	E	S	I	A	A	A	T	P	K	L	A	G	L	I	F	G	A	A	D	X	A	A	D	I	G
Template Known Secondary structure		S					S					S	S			S													.	.	.	.	.	.	.	.	.												S						T						T	S		T	T																T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.										.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	R	S	P	E	G	T	E	L	L	F	A	R	C	S	I	L	Q	A	A	R	S	A	G	I	Q	A	F	D	T	V	Y	S	D	A	N	N	E	A	G	F	L	Q	E	A	A	H	I	K	Q	L	G	F	D	G	K	S	L	I	N	P	R	Q	I	D	L	L	H	N	L	Y	A	P	T	Q	K	E	V
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		A	A	S	T	W	E	P	.	.	L	A	L	A	R	A	R	L	V	S	A	C	A	X	N	G	I	P	A	I	D	A	P	F	F	D	V	H	D	V	S	G	L	Q	S	E	T	L	R	A	S	D	F	G	F	S	A	K	A	A	I	H	P	A	Q	I	S	T	I	N	T	L	F	T	P	T	A	A	E	I
Template Known Secondary structure				S	S	T	G	G	.	.	G															T									S		S	S																T							S	S	G	G	G								T	S
Template Predicted Secondary structure									.	.
Template SS confidence
		163	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions