 |
Job Description | P0A9I1 | Confidence | 23.35% | Date | Thu Jan 5 11:10:18 GMT 2012 |
Rank | 130 | Aligned Residues | 94 |
% Identity | 14% | Template | c3ogrA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:beta-galactosidase; |
PDBTitle: complex structure of beta-galactosidase from trichoderma reesei with2 galactose
|
Resolution | 1.50 Å |
|
 |
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |
|
|
|  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
Query Sequence |   |
A | A | M | V | S | N | S | F | I | Y | P | A | D | A | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | F | D | L | E | D | S | V | A | L | R | E | K | D | T | A | R | R | M | V | Y | H | A | L | Q | H | P | L | Y | R | D | I | E | T | I | V | R | V | . |
. |
. |
. |
. |
. |
. |
. |
N | A | L | D | S |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |   |
|
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
| . | . | . | . | . | . | . | . |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|   |
|
|   |
|   |
|   |
|   |
|
|
|   |
|
|   |
|
|
|   |   |
|   |   |
|
|
|
|   | . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |
|
|   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|
|
Template Sequence |   |
L | D | V | F | H | K | I | K | A | L | G | F | N | T | V | S | F | Y | V | D | W | A | L | L | E | G | K | P | G | R | F | R | A | D | G | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | S | L | E | P | F | F | E | A | A | T | K | A | G | I | Y | L | L | A | R | P | G | P | Y | I | N | A | E | V | S | G | G | G | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
|
|  |  |  |  |
| S | B | T | T | B |
|
|
|
| G | G | . | . | . | . | . | . | . | . | . | . | G |
| S |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  | S |
|
|
| T | T | B | G | G | G | G |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
  |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | W | G | V | N | D | L | E | A | V | V | R | G | G | A | D | V | V | R | L | P | K | T | D | T | . |
. |
. |
. |
. |
A | Q | D | V | L | D | I | E | K | E | I | L | R | I | E | K | A | C | G | R | E | P | G | S | T | G | L | L | A | A | I | E | S |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|
|   |   |
|
|
|
|
Template Sequence |   |
P | G | W | L | Q | R | V | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | K | L | R | T | D | A | P | D | Y | L | H | A | T | D | N | Y | V | A | H | I | A | S | I | I | A | K | A | Q | I | T | N | G | G | P | V | I | L | Y | Q | P | E | N |
Template Known Secondary structure |   |
| G | G | G | G | G |
|
| . | . | . | . | . | . | . | . | . | . | . | . | S |
| T | T | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | B | G | G | G | T | S | S |  |  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
149 | 150 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|