Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9I1
Confidence35.42%DateThu Jan 5 11:10:18 GMT 2012
Rank112Aligned Residues88
% Identity14%Templatec3l4bG_
PDB info PDB header:transport proteinChain: G: PDB Molecule:trka k+ channel protien tm1088b; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima
Resolution3.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RTRRSMLFVPGANAAMVSNSFIYPADALMFDLEDSVALREKDTARRMVYHALQHPL. YRDIETIVRVNALDSEWGVNDLE
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Template Sequence  KLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRD. . . . . . . . . EVNLFIAQLVMKDFGVKRVVSLVNDPGN. . . . . . ME
Template Known Secondary structure  SSSS
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   42.......50.........60.........70...... ...80.........90.........100.... ..
 
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Query Sequence  AVVRGGADVVRLPKTDTAQDVLDI
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Template Sequence  IFKKMGITTVLNLTTLITNTVEAL
Template Known Secondary structure  T



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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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