Job Description P0A9I1 Confidence 41.37% Date Thu Jan 5 11:10:18 GMT 2012 Rank 102 Aligned Residues 86 % Identity 19% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		S	M	L	F	V	P	G	A	N	A	A	M	V	S	N	S	F	I	Y	P	A	D	A	L	M	F	D	L	E	D	S	V	A	L	R	E	K	D	T	A	R	R	M	V	Y	H	A	L	Q	H	P	L	Y	R	.	D	I	E	T	I	V	R	V	N	A	L	D	S	E	W	G	V	N	D	L	E	A	V	V	R
Query Conservation																																																								.
Alig confidence																																	.	.	.	.	.	.	.	.	.															.														.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Template Sequence		R	A	V	L	G	N	A	A	N	E	E	I	X	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	.	.	.	.	.	.	.	.	.	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	A	H	Y	D	D	E	.	.	.	.	.	.	V	A	Y	I	T	E
Template Known Secondary structure						S		T	T	S							T	T	G	G	G		S							S			.	.	.	.	.	.	.	.	.															S	S	S							S	S				.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.										.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520							.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	A	D	V	V	R	L	P	K	T	D	T	A	Q	D	V	L	D	I	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	A	N	Q	V	V	X	G	E	R	E	I	A	R	T	X	L	E	L	L	E
Template Known Secondary structure		T	T		S
Template Predicted Secondary structure
Template SS confidence
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions