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Job DescriptionP0A9I1
Confidence99.40%DateThu Jan 5 11:10:18 GMT 2012
Rank33Aligned Residues234
% Identity15%Templatec1h6zA_
PDB info PDB header:transferaseChain: A: PDB Molecule:pyruvate phosphate dikinase; PDBTitle: 3.0 a resolution crystal structure of glycosomal pyruvate2 phosphate dikinase from trypanosoma brucei
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30......... 40.........50........ .60.........70..
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Query Sequence  RRSMLFVPGANAAMVSNSFIYPADAL. MFDLEDSVALREKDTARRM. . . . . . . . . . . . . . . . . . . . VYHALQHPLYRDIE
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Template Sequence  KRLGVRTNADTPADAAKARSFGAEGVGLCRTEHMFFEGSRINFIREMILADSASGRKAALDKLLPIQRADFVGILRAMRG
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SSTTT

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   557..560.........570.........580.........590.........600.........610.........620.........630......
 
   73......80. ........90.....
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Query Sequence  TIVRVNALD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SEWGVNDLEAVVRG. . . .
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Template Sequence  LPVTIRLLDPPLHEFVPHDAAAQFELAQKLGMPAEKVRNRVNALHELNPMLGHRGCRLGITYPEIYNMQVRAIIEAAIAV
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S
GGGG

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   637..640.........650.........660.........670.........680.........690.........700.........710......
 
   96...100.........110.........120.........130 .........140.........150.........160......
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Query Sequence  . . . . . . GADVVRLPKTDTAQDVLDIEKEILRIEKACGREPG. . . STGLLAAIESPLGITRAVEIAHASERLIGIALGAED
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Template Sequence  SEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTADSIAQK. . . ADFFSFGTND
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   717..720.........730.........740.........750.........760.........770.........780... ......790...
 
   167.. 170........ .180.........190.........200.........210.........220...
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Query Sequence  YVR. NLRTERSPE. . . . . . . . . . . . . . . . . . . . . . GTELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEAAHIKQ
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Template Sequence  LTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEHGGDPAT. . . IGFCHK
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   794.....800.........810.........820.........830.........840.........850.........860.... .....870
 
   224.....230.........240.........250......
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Query Sequence  LGFDGKSLINPRQIDLLHNLYAPTQKEVDHARR
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Template Sequence  VGLD. YVSCSPFRVPVAI. . VAAAHASIKDRRA
Template Known Secondary structure  T
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   871... .....880....... ..890.........900
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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