Job Description P39364 Confidence 99.19% Date Thu Jan 5 11:59:55 GMT 2012 Rank 35 Aligned Residues 216 % Identity 14% Template d2tpsa_ SCOP info TIM beta/alpha-barrel Thiamin phosphate synthase Thiamin phosphate synthase Resolution 1.25

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	W	L	K	E	V	I	G	T	E	K	A	V	I	A	M	C	H	L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A
Query Conservation
Alig confidence																				.	.	.	.														.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation																				.	.	.	.														.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		M	T	R	I	S	R	E	M	M	K	E	L	L	S	V	Y	F	I	.	.	.	.	M	G	S	N	N	T	K	A	D	P	V	T	V	.	.	.	.	.	.	.	.	.	.	V	Q	K	A	L	K	G	G	A	T	L	Y	Q	F	.	.	.	.	R	E	K	G	G	D	A	L	T	G	E	A	R	I	K	F	A
Template Known Secondary structure		S	S											T	T					.	.	.	.			G	G	G		S	S						.	.	.	.	.	.	.	.	.	.								T		S					.	.	.	.				S	T	T
Template Predicted Secondary structure																				.	.	.	.														.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.											.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L	W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I	V	P	E
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Sequence		E	K	A	Q	A	A	C	R	E	A	G	V	P	F	I	V	N	D	D	V	E	L	A	L	N	L	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	I	H	I	G	Q	.	.	.	.	.	.	E	D	A	N	A	K	E	V	R	A	A	I	G	D	M	I	L	G	V	.	.	.	.	.	.	.
Template Known Secondary structure												T							S									T		.	.	.	.	.	.	.	.	.	.	.	.	.	S						T	.	.	.	.	.	.	T	S	S										T	T	S					.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.																				.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.														.	.	.	.	.	.	110							.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.
Predicted Secondary structure																																					.	.																																					.
Query SS confidence																																					.	.																																					.
Query Sequence		A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	.	.	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I	.	A	D	G	C	V	T
Query Conservation																																					.	.																																					.
Alig confidence		.	.																																		.	.																																					.
Template Conservation		.	.
Template Sequence		.	.	S	A	H	T	M	S	E	V	K	Q	A	E	E	D	G	A	D	Y	V	G	L	G	P	I	Y	P	T	E	T	K	K	D	T	R	A	V	Q	G	V	S	L	I	E	A	V	R	R	Q	G	I	S	I	P	I	V	G	I	G	G	I	T	I	D	N	A	A	P	V	I	Q	A	G	A	D	G	V	S	M
Template Known Secondary structure		.	.				S											T		S							S	S				S	S	S	S						T	T									T	T									S	S			T	T	T	S						T	T		S
Template Predicted Secondary structure		.	.
Template SS confidence
				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V	S	Q	F	M	E	K	V	H	H	I	R
Query Conservation
Alig confidence								.	.	.					.	.
Template Conservation								.	.	.					.	.
Template Sequence		I	S	A	I	S	Q	.	.	.	A	E	D	P	.	.	E	S	A	A	R	K	F	R	E	E	I	Q	T	Y	K
Template Known Secondary structure		S					T	.	.	.	S	S			.	.
Template Predicted Secondary structure								.	.	.					.	.
Template SS confidence
		208	.	210	.	.	.				.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions