Job Description P39364 Confidence 34.10% Date Thu Jan 5 11:59:55 GMT 2012 Rank 367 Aligned Residues 200 % Identity 13% Template d2d69a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.90

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		4	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																																																			.	.	.
Query SS confidence								.																																																			.	.	.
Query Sequence		L	K	E	V	I	G	.	T	E	K	A	V	I	A	M	C	H	L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	.	.	.	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M
Query Conservation								.																																																			.	.	.
Alig confidence								.										.	.	.	.	.	.	.	.																.	.	.	.											.	.			.	.	.										.	.
Template Conservation																		.	.	.	.	.	.	.	.																.	.	.	.											.	.															.	.
Template Sequence		I	R	E	F	M	G	V	K	D	R	P	L	T	A	T	V	.	.	.	.	.	.	.	.	P	K	P	K	M	G	W	S	V	E	E	Y	A	E	I	.	.	.	.	A	Y	E	L	W	S	G	G	I	D	.	.	L	L	K	D	D	E	N	F	T	S	F	P	F	N	.	.	R	F	E	E	R	V	R	K	L
Template Known Secondary structure							T			S	S							.	.	.	.	.	.	.	.		S	S	S	S											.	.	.	.							T	T		S	.	.						T	T		S		B	T	T	B	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.																.	.	.	.											.	.															.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.									.	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		A	R	I	I	G	Q	L	M	S	D	I	.	.	R	I	P	F	G	V	N	V	L	W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I
Query Conservation													.	.
Alig confidence													.	.																									.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.
Template Sequence		Y	R	V	R	D	R	V	E	A	E	T	G	E	T	K	E	Y	L	I	N	I	T	G	P	V	N	I	M	E	K	R	A	E	M	V	A	N	.	.	.	.	.	.	.	E	G	G	Q	Y	V	M	I	D	I	V	V	A	G	W	S	A	L	Q	Y	M	R	E	V	T	E	D	L	G	L	A	I	H	A	H	R
Template Known Secondary structure													S	S							B			S	S														.	.	.	.	.	.	.		T																											T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.								.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.							.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.			.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.																																													.	.	.	.	.				.	.
Query SS confidence												.	.	.	.	.	.																																													.	.	.	.	.				.	.
Query Sequence		V	P	E	A	A	V	Y	L	G	N	.	.	.	.	.	.	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	.	.	.	.	.	T	V	V	.	.	L	A	N	T	G	V	C	L	E	N
Query Conservation												.	.	.	.	.	.																																													.	.	.	.	.				.	.
Alig confidence												.	.	.	.	.	.												.	.	.	.																														.	.	.	.	.				.	.
Template Conservation																													.	.	.	.
Template Sequence		A	M	H	A	A	F	T	R	N	P	R	H	G	I	T	M	L	A	L	A	K	A	A	R	M	I	G	.	.	.	.	V	D	Q	I	H	T	G	T	A	V	G	K	M	A	G	N	Y	E	E	I	K	R	I	N	D	F	L	L	S	K	W	E	H	I	R	P	V	F	P	V	A	S	G	G	L	H	P	G	L
Template Known Secondary structure		T	T	T					S		T	T	S	S														T	.	.	.	.		S									S	S	S																S			T	T										S	S			G	G	G
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.					.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		225	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	E	Q	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	P	E	L	I	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions