Return to main results Retrieve Phyre Job Id

Job DescriptionP39364
Confidence98.04%DateThu Jan 5 11:59:55 GMT 2012
Rank79Aligned Residues214
% Identity11%Templated2b4ga1
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60.........70 .........80.........90.........100 ....
Predicted Secondary structure 













.................








.
Query SS confidence 



























. . . . . . . . . . . . . . . . .





























.



Query Sequence  WDDLMALQNGGVDAVMFSNEFSLPYLTK. . . . . . . . . . . . . . . . . VRPETTAAMARIIGQLMSDIRIPFGVNVLW. DPVA
Query Conservation    

  
 
 








    
    .................           

  
     




  
 .
 
 
Alig confidence 



























.................





























.



Template Conservation            
 
     
                                                

 
 
       
Template Sequence  EEDLRRMTESESGSLIGKSCTLAPRTGNPEPRYFGLPLGSINSMGLPNLGVDFYLSYAAQTHDYSRKPLFLSMSGLSVEE
Template Known Secondary structure  SS
S

SS
B

S
S

TT




BS
T

TTT



SS
Template Predicted Secondary structure 



































Template SS confidence 















































































   27..30.........40.........50.........60.........70.........80.........90.........100......
 
   105....110. ........120.........130.........140.........150.........160.........170........
Predicted Secondary structure 
......



































Query SS confidence 






. . . . . .


































































Query Sequence  SFDLAMA. . . . . . TGAKFIREIFTGAYASDFGVWDTNVGETIRHQHRIGAGEVKTLFNIVPEAAVYLGNRDICSIAKSTV
Query Conservation     

  ......  
 


           
 
  
                 
  

           

  
   
 
Alig confidence 






......




































.



..






















Template Conservation                    
 

           
             
  .    ..

 

                  
Template Sequence  SVEMVKKLVPITKEKGTILELNLSCPNVPGKPQVGYDFDTTRTYLQKVSE. AYGL. . PFGVKMPPYFDIAHFDMAAAVLN
Template Known Secondary structure 






STT


GGG
.
S..





T
Template Predicted Secondary structure 















.


..






Template SS confidence 















































































   107..110.........120.........130.........140.........150...... ...160 .........170.........180...
 
   179180.........190....... ..200.........210.........220 .........230
Predicted Secondary structure 












...........................








.
Query SS confidence 


















. . . . . . . . . . . . . . . . . . . . . . . . . . .






















.









Query Sequence  FNNHPDALCVSGLTAGTRT. . . . . . . . . . . . . . . . . . . . . . . . . . . DSALLKRVKETVPDTVVLANTGV. CLENVEEQLS
Query Conservation 

 
     


  

   ...........................    
    
     

 




.
 


     
Alig confidence 


















...........................






















.









Template Conservation     
   
                            
  
       
  
  
      




 


    

 
 

Template Sequence  DFPLVKFITCVNSIGNGLVIDPANETVVIKPKQGFGGLGGKYVLPTALANVNAFFRRCPDKLVFGCGGVYSGEEAFLHIL
Template Known Secondary structure  T
TT



TTTTS

GGGGGGG
TTSSS

S
Template Predicted Secondary structure 











































Template SS confidence 















































































   184.....190.........200.........210.........220.........230.........240.........250.........260...
 
   231 ........240.........250.........260......
Predicted Secondary structure  .










Query SS confidence 
.


































Query Sequence  I. ADGCVTATTFKKDGVFANFVDQARVSQFMEKVHHI
Query Conservation   .









   
      
 


  

  
   
Alig confidence 
.













.......













Template Conservation   




 


     
.......      
  

   
Template Sequence  AGASMVQVGTALHDEG. . . . . . . PIIFARLNKELQEI
Template Known Secondary structure  TS
.......TT
Template Predicted Secondary structure 






.......
Template SS confidence 




































   264.....270......... 280.........290...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions