|   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |
Query SS confidence |   |
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Query Sequence |   |
A | M | C | H | L | R | A | L | P | G | D | P | S | F | D | A | Q | L | G | M | N | W | V | I | D | K | A | W | D | D | L | M | A | L | Q | N | G | G | V | D | A | V | M | F | S | N | E | F | S | L | P | Y | L | T | K | V | R | P | E | T | T | A | A | M | A | R | I | I | G | Q | L | M | S | D | I | R | I | P | F | G |
Query Conservation |   |
|   |
|
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|   |
|
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|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|   |
|   |
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|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |
|
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|
Alig confidence |   |
|
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| . | . |
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| . | . | . | . |
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| . | . |
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| . |
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Template Conservation |   |
|
|   |   |   |   |   |
|
|
|   |   |   | . | . |
|   |
|
|   |   |   |   |   |   |   | . | . | . | . |
|   |   |   |   |   |   |
|
|   |
|
|   |   | . | . |   |
|
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|
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   | . |   |   |   |
|
|
Template Sequence |   |
G | S | I | V | A | I | V | T | P | M | D | E | K | . |
. |
G | N | V | C | R | A | S | L | K | K | L | . |
. |
. |
. |
I | D | Y | H | V | A | S | G | T | S | A | I | V | S | . |
. |
V | G | T | T | G | E | S | A | T | L | N | H | D | E | H | A | D | V | V | M | M | T | L | D | L | A | D | G | . |
R | I | P | V | I |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
|
| B |
| T | T | . | . | S | S | B |
|  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  | T |
|
|  |  |  |  | . | . | S | S | T | T | T | T | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | S | S |
|  |  |
Template Predicted Secondary structure |   |
|
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|  |  |
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|
| . | . |
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|
|  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |
|
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|  |  |  |  | . | . |
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|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
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|  |  |  |
Template SS confidence |   |
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  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | |
|
. | . | . | 20 | . | . | . | . | . | . | . | |
|
|
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
70 | . | . | . | . |
  |
  |   |
96 | . | . | . | |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | |
|
. | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
Predicted Secondary structure |   |
 |  |  |
| . |
|
|  |  |  |  |  |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|
| . | . |  |  |
|
|
|  |  |  |  |  |
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|  |  |  |
Query SS confidence |   |
|
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| . |
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| . |
. |
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Query Sequence |   |
V | N | V | L | . |
W | D | P | V | A | S | F | D | L | A | M | A | T | G | A | K | F | I | R | E | I | F | T | G | A | Y | A | S | D | F | G | V | W | D | T | N | V | G | E | T | I | R | H | Q | H | R | I | G | A | G | E | V | K | . |
. |
T | L | F | N | I | V | P | E | A | A | V | Y | L | G | N | R | D | I | C | S |
Query Conservation |   |
|   |   |
| . |   |
|   |
|   |   |   |   |
|
|   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
| . |
|
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|
| . | . | . | . |
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| . | . |
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|
|
Template Conservation |   |
  |
|
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|   | . | . | . | . |   |   |
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |
|
|
|   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
A | G | T | G | A | N | A | T | A | E | A | I | S | L | T | Q | R | F | N | . |
. |
. |
. |
D | S | G | I | V | G | C | L | T | V | T | P | Y | Y | N | R | P | S | Q | E | G | L | Y | Q | H | F | K | A | I | A | E | H | T | D | L | P | Q | I | L | Y | N | V | P | S | A | T | G | C | D | L | L | P | E | T | V | G | R |
Template Known Secondary structure |   |
 |  |
|
|
| S | S |  |  |  |  |  |  |  |  |  | T | T | T | . | . | . | . | T | S | S |
|
|  |  |  |  |  |
|
|
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S |
|  |  |  |  |  |
|  |  |  |  | S |
|
|
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |
|
|
|
|  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
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|
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|
|
|
|
|
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|
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | |
|
|
|
. | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | |
|
|
|
|
|
. | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |
|
|
|
Query SS confidence |   |
|
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|
|
|
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|
|
| . |
. |
. |
. |
. |
. |
|
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|
|
Query Sequence |   |
I | A | K | S | T | V | F | N | N | H | P | D | A | L | C | V | S | G | L | T | A | G | T | R | T | D | S | A | L | L | K | R | V | K | E | T | V | P | D | T | V | V | L | A | N | T | G | V | C | L | E | N | V | E | E | Q | L | S | I | A | D | G | C | V | T | A | T | T | . |
. |
. |
. |
. |
. |
F | K | K | D | G | V |
Query Conservation |   |
|   |   |   |
|   |
|
|   |
|   |   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|
|   |
|
|
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|
|   |
|
|
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
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| . |
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|
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|
| . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |
|   |
|
|
|   |
| . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
L | A | K | V | K | N | I | I | G | I | K | E | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | G | N | L | T | R | V | N | Q | I | K | E | L | V | S | D | . |
D | F | V | L | L | S | G | D | D | A | S | A | L | D | F | M | Q | L | G | G | H | G | V | I | S | V | T | A | N | V | A | A | R | D | M | A | Q | M | C | K |
Template Known Secondary structure |   |
 |  | T | S | T | T |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | S |
|
| T | T |  |  |  |  |  |  | T | T | S |
| T | . | T | S |  |  |  |  |
|
| G | G | G |  |  |  |  |  |  | T | T |
|
|  |  |  |  | S | G | G | G | T |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
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|
|
|
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|
|
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|
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|
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
  |
  |   |
247 | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | A | N | F | V | D | Q | A | R | V | S | Q | F | M | E | K | V | H | H | I | R | R |
Query Conservation |   |
  |   |   |   |   |
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
Template Sequence |   |
L | A | A | E | G | H | F | A | E | A | R | V | I | N | Q | R | L | M | P | L | H | N |
Template Known Secondary structure |   |
 |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
  |