Return to main results Retrieve Phyre Job Id

Job DescriptionP39364
Confidence97.99%DateThu Jan 5 11:59:55 GMT 2012
Rank82Aligned Residues102
% Identity17%Templated1tv5a1
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   157..160.........170.........180.........190........ .200.........210 ......
Predicted Secondary structure 





















...................

.


Query SS confidence 









































. . . . . . . . . . . . . . . . . . .











.





Query Sequence  IVPEAAVYLGNRDICSIAKSTVFNNHPDALCVSGLTAGTRTD. . . . . . . . . . . . . . . . . . . SALLKRVKETVP. DTVVLA
Query Conservation 
           

  
   
 

 
     


  

    ...................   
    
   .  

 
Alig confidence 
























.















...................











.





Template Conservation 
 


 

        

  
   
. 



  

              




  
 
 

  
  
       



 
Template Sequence  VFVKLAPDLNQEQKKEIADVLLETN. IDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIA
Template Known Secondary structure 
S


TT.
S


BS




GGGTT

STTT
S
Template Predicted Secondary structure 






.


























Template SS confidence 















































































   426...430.........440.........450 .........460.........470.........480.........490.........500....
 
   217..220 .........230. ........240.........250.........260......
Predicted Secondary structure 


.
.










Query SS confidence 



.










.


































Query Sequence  NTGV. CLENVEEQLSI. ADGCVTATTFKKDGVFANFVDQARVSQFMEKVHHI
Query Conservation 



.
 


      .









   
      
 


  

  
   
Alig confidence 



.










.













.......













Template Conservation   


    

   
 


  


 

    
.......
     
  

   
Template Sequence  SGGIFSGLDALEKIEAGASVCQLYSCLVFNG. . . . . . . MKSAVQIKRELNHL
Template Known Secondary structure  SS

STTSG.......GG
Template Predicted Secondary structure 











.......
Template SS confidence 



















































   505....510.........520.........530..... ....540.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions