Job Description P39364 Confidence 99.49% Date Thu Jan 5 11:59:55 GMT 2012 Rank 15 Aligned Residues 220 % Identity 12% Template d1rpxa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel D-ribulose-5-phosphate 3-epimerase Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		S	W	L	K	E	V	I	G	T	E	K	A	V	I	A	M	C	H	L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	.	.	R	P	E	T	T	A	A	M
Query Conservation																																																																								.	.
Alig confidence																			.	.	.	.						.	.	.	.	.											.	.	.	.	.	.	.														.									.	.					.	.	.	.
Template Conservation																			.	.	.	.						.	.	.	.	.											.	.	.	.	.	.	.														.															.	.	.	.
Template Sequence		S	R	V	D	K	F	S	K	S	D	I	I	V	S	P	S	I	.	.	.	.	L	S	A	N	F	.	.	.	.	.	S	K	L	G	E	Q	V	K	A	I	.	.	.	.	.	.	.	E	Q	A	G	C	D	W	I	H	V	D	V	M	.	D	G	R	F	V	P	N	I	T	I	G	P	L	V	.	.	.	.
Template Known Secondary structure			G	G	G	G	S		T	T	S						B	G	.	.	.	.	G	G	S		G	.	.	.	.	.	G	G									.	.	.	.	.	.	.			T	T										.	B	S	S	S	S	S		B							.	.	.	.
Template Predicted Secondary structure																			.	.	.	.						.	.	.	.	.											.	.	.	.	.	.	.														.															.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.					.	.	20	.	.						.	.	.	.	.	.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L	W	.	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I	V
Query Conservation																							.
Alig confidence		.	.	.																			.																.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation		.	.	.																																			.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Sequence		.	.	.	V	D	S	L	R	P	I	T	D	L	P	L	D	V	H	L	M	I	V	E	P	D	Q	R	V	P	D	F	I	K	A	G	A	D	.	.	.	.	.	.	.	I	V	S	V	H	C	E	Q	S	S	T	I	H	L	H	R	T	I	N	Q	I	K	S	L	G	A	.	.	.	.	.	.	.	K	A	G
Template Known Secondary structure		.	.	.					G	G	G			S								S	S	S											T	T		S	.	.	.	.	.	.	.							S	T	T	T		S												T	T	S	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.																																			.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template SS confidence
					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.								.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.					.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.
Predicted Secondary structure																																																				.	.	.	.																								.
Query SS confidence																																																				.	.	.	.																								.
Query Sequence		P	E	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	.	.	.	.	V	P	D	T	V	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I	.	A	D
Query Conservation																																																				.	.	.	.																								.
Alig confidence																																																				.	.	.	.																								.
Template Conservation
Template Sequence		V	V	L	N	P	G	T	P	L	T	A	I	E	Y	V	L	D	A	V	D	L	V	L	I	M	S	V	N	P	G	F	G	G	Q	S	F	I	E	S	Q	V	K	K	I	S	D	L	R	K	I	C	A	E	R	G	L	N	P	W	I	E	V	D	G	G	V	G	P	K	N	A	Y	K	V	I	E	A	G	A	N
Template Known Secondary structure						T	T			G	G	G	G	T	T	T	T	T	T		S						S	S		T	T		S	S					T	T																T									S	S			T	T	T								T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	V	T	A	T	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V	S	Q	F	M	E	K	V	H	H	I	R	R
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.
Template Sequence		A	L	V	A	G	S	A	V	F	G	A	P	D	.	.	.	.	.	.	.	.	.	Y	A	E	A	I	K	G	I	K	T	S	K	R
Template Known Secondary structure						S					T	S	S		.	.	.	.	.	.	.	.	.										T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.										.	.	.	.	220	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions