Job Description P39364 Confidence 31.86% Date Thu Jan 5 11:59:55 GMT 2012 Rank 370 Aligned Residues 196 % Identity 14% Template d1rbla1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.20

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		4	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																																																			.	.	.
Query SS confidence								.																																																			.	.	.
Query Sequence		L	K	E	V	I	G	.	T	E	K	A	V	I	A	M	C	H	L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	.	.	.	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M
Query Conservation								.																																																			.	.	.
Alig confidence								.										.	.	.	.	.	.	.	.																.	.	.	.											.	.			.	.	.										.	.
Template Conservation																		.	.	.	.	.	.	.	.																.	.	.	.											.	.															.	.
Template Sequence		E	R	D	L	L	N	K	Y	G	R	P	M	L	G	C	T	.	.	.	.	.	.	.	.	I	K	P	K	L	G	L	S	A	K	N	Y	G	R	A	.	.	.	.	V	Y	E	C	L	R	G	G	L	D	.	.	F	T	K	D	D	E	N	I	N	S	Q	P	F	Q	.	.	R	W	R	D	R	F	L	F	V
Template Known Secondary structure							T			S	S						B	.	.	.	.	.	.	.	.		S	S	S	S											.	.	.	.							T	T		S	.	.						T	T		S	S	B	T	T	B	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.																.	.	.	.											.	.															.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.									.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.
		80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.					.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure													.	.																																																.	.	.	.
Query SS confidence													.	.																																																.	.	.	.
Query Sequence		A	R	I	I	G	Q	L	M	S	D	I	.	.	R	I	P	F	G	V	N	V	L	W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	.	.	.	.	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T
Query Conservation													.	.																																																.	.	.	.
Alig confidence													.	.																		.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	A	I	H	K	S	Q	A	E	T	G	E	I	K	G	H	Y	L	N	V	T	A	P	T	C	E	E	M	M	.	.	.	.	.	.	.	.	.	.	K	R	A	E	F	A	K	E	L	G	M	P	I	I	M	H	D	F	L	T	A	G	F	T	A	N	T	T	L	A	K	W	C	R	D	N	G	V	L	L
Template Known Secondary structure													S	S											S	S						.	.	.	.	.	.	.	.	.	.									T	T		S																									T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.											.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.							.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	F	N	I	V	P	E	A	A	V	Y	L	G	N	.	.	.	.	.	.	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.												.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.
Template Sequence		H	I	H	R	A	M	H	A	V	I	D	R	Q	R	N	H	G	I	H	F	R	V	L	A	K	C	L	R	L	S	G	.	.	.	.	G	D	H	L	H	S	G	T	V	V	G	K	L	E	G	D	K	A	S	T	L	G	F	V	D	L	M	R	E	D	H	I	E	A	D	R	S	R	G	V	F	F	T	Q	D
Template Known Secondary structure						T	T						S		S	S	S	S															.	.	.	.		S							S	S	S	S	S																	S					B	G	G	G	T	B		S
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.					.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
									212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	T	V	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.					.
Template Conservation													.
Template Sequence		W	A	S	M	P	G	V	L	P	V	A	.	S	G	G	I	H	V	W	H	M	P	A	L	V	E
Template Known Secondary structure			T	T									.		S	S			G	G	G
Template Predicted Secondary structure													.
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions