 |
Job Description | P39364 | Confidence | 95.37% | Date | Thu Jan 5 11:59:55 GMT 2012 |
Rank | 164 | Aligned Residues | 90 |
% Identity | 14% | Template | d1kbia1 |
SCOP info | TIM beta/alpha-barrel
| FMN-linked oxidoreductases
| FMN-linked oxidoreductases
|
Resolution | 2.30 |
|
 |
  |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | |
|
|
|
. | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 210 | . | . | . | . | . | . | . | . | . | 220 | |
. | . | . | . | . | . | . | . | . | 230 | . | |
. | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Query Sequence |   |
S | I | A | K | S | T | V | F | N | N | H | P | D | A | L | C | V | S | G | L | T | A | . |
. |
. |
. |
G | T | R | T | D | S | A | L | L | K | R | V | K | E | T | . |
. |
. |
. |
. |
. |
V | P | D | T | V | V | L | A | N | T | G | V | . |
C | L | E | N | V | E | E | Q | L | S | I | . |
A | D | G | C | V | T | A | T |
Query Conservation |   |
  |
|   |   |   |
|   |
|
|   |
|   |   |   |   |   |
|
|
|   |   |
| . | . | . | . |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   | . | . | . | . | . | . |   |   |   |   |
|
|   |
|
|
|
|
| . |
|   |
|
|
|   |   |   |   |   |   | . |
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |   |
| . |
|
|
|
|   |
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
Template Sequence |   |
E | D | V | I | K | A | A | E | I | G | . |
V | S | G | V | V | L | S | N | H | G | G | R | Q | L | D | F | S | R | A | P | I | E | V | L | A | E | T | M | P | I | L | E | Q | R | N | L | K | D | K | L | E | V | F | V | D | G | G | V | R | R | G | T | D | V | L | K | A | L | C | L | G | A | K | G | V | G | L | G | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T | . |
| S |  |  |  |  |
|
| T | T | T | T | S | S | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| B | T | T | B |  |  |  |  |  | S | S |
|
| S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
355 | . | . | . | . | 360 | . | . | . | . | |
. | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . |
  |
  |   |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | F | K | K | D | G | V | F | A | N | F | V | D | Q | A | R | V | S | Q | F | M | E | K | V | H | H |
Query Conservation |   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|
|   |   |
| . | . | . |   |   |
|
|   |   |   |
|   |   |
|   |   |
Template Sequence |   |
P | F | L | Y | A | N | S | C | Y | G | . |
. |
. |
R | N | G | V | E | K | A | I | E | I | L | R | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
434 | . | . | . | . | . | 440 | . | . | . | |
|
|
. | . | . | . | . | . | 450 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|