Job Description P39364 Confidence 99.23% Date Thu Jan 5 11:59:55 GMT 2012 Rank 29 Aligned Residues 227 % Identity 15% Template d1ka9f_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Histidine biosynthesis enzymes Resolution 2.30

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		11	.	.	.	.	.	.	.	.							20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		E	K	A	V	I	A	M	C	H	.	.	.	.	.	.	L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.															.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Sequence		A	K	R	I	V	P	C	L	D	V	H	A	G	R	V	V	K	G	V	N	F	V	N	L	R	D	A	G	D	.	.	.	.	.	.	.	.	P	V	E	A	A	R	A	Y	D	E	A	G	A	D	E	L	V	F	L	D	I	S	A	T	H	E	E	R	A	I	L	L	D	V	.	.	.	.	.	.	.	V	A
Template Known Secondary structure			B										T	T			T	T				S	S			S	S	T	T		.	.	.	.	.	.	.	.												T		S									S	S	T	T									.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.									.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.								.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L	W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I	V	P	E	A	A	V	Y
Query Conservation
Alig confidence																																				.	.	.
Template Conservation																																				.	.	.
Template Sequence		R	V	A	E	R	V	F	I	P	L	T	V	G	G	G	V	R	S	L	E	D	A	R	K	L	L	L	S	G	A	D	K	V	S	.	.	.	V	N	S	A	A	V	R	R	P	E	L	I	R	E	L	A	D	H	F	G	A	Q	A	V	V	L	A	I	D	A	R	W	R	G	D	F	P	E	V	H	V	A	G
Template Known Secondary structure					T	T			S						S	S			S											T		S				.	.	.									T												G	G	G											T	T							T	T
Template Predicted Secondary structure																																				.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
					165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.
Predicted Secondary structure		.	.	.																												.	.	.																														.												.
Query SS confidence		.	.	.																												.	.	.																														.												.
Query Sequence		.	.	.	L	G	N	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	.	.	.	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	.	C	L	E	N	V	E	E	Q	L	S	I	.	A	D	G	C	V
Query Conservation		.	.	.																												.	.	.																														.												.
Alig confidence		.	.	.																		.										.	.	.																			.											.												.
Template Conservation																						.																															.
Template Sequence		G	R	V	P	T	G	L	H	A	V	E	W	A	V	K	G	V	E	L	G	.	A	G	E	I	L	L	T	S	M	D	R	D	G	T	K	E	G	Y	D	L	R	L	T	R	M	V	A	E	A	V	.	G	V	P	V	I	A	S	G	G	A	G	R	M	E	H	F	L	E	A	F	Q	A	G	A	E	A	A	L
Template Known Secondary structure		T	T																		T	.									T	T	T	T	T	T		S															.	S	S						S				S										T	T		S
Template Predicted Secondary structure																						.																															.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	T	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V	S	Q	F	M	E	K
Query Conservation
Alig confidence									.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		A	A	S	V	F	H	F	.	.	.	.	.	G	E	I	P	I	P	K	L	K	R	Y	L	A	E
Template Known Secondary structure			S					T	.	.	.	.	.	T	S	S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230						.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions