Return to main results Retrieve Phyre Job Id

Job DescriptionP39364
Confidence29.47%DateThu Jan 5 11:59:55 GMT 2012
Rank374Aligned Residues105
% Identity13%Templated1ea0a2
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution3.0

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   157..160.........170.........180.........190..... ....200......... 210........
Predicted Secondary structure 


















...........



.......




Query SS confidence 






































. . . . . . . . . . .













. . . . . . .








Query Sequence  IVPEAAVYLGNRDICSIAKSTVFNNHPDALCVSGLTAGT. . . . . . . . . . . RTDSALLKRVKETV. . . . . . . PDTVVLANT
Query Conservation 
           

  
   
 

 
     


  

 ...........      
    
  .......   

 


Alig confidence 




















....













...........













.......








Template Conservation 
 


     
  

 




....


 
 


  






       


 
  
  
   
   


  
 




Template Sequence  VTVKLVSRSGIGTIAAGVAKA. . . . NADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDG
Template Known Secondary structure 

TTT....T
S
TT


SSTTS


TTT
TTTSS
Template Predicted Secondary structure 




....





















Template SS confidence 















































































   996...1000.........1010...... ...1020.........1030.........1040.........1050.........1060.........1070.
 
   219220 .........230. ........240. ........250.. .......260.....
Predicted Secondary structure 

.
.

......................








..
Query SS confidence 

.










.









. . . . . . . . . . . . . . . . . . . . . .










. .












Query Sequence  GV. CLENVEEQLSI. ADGCVTATTF. . . . . . . . . . . . . . . . . . . . . . KKDGVFANFVD. . QARVSQFMEKVHH
Query Conservation 

.
 


      .









......................   
      
.. 


  

  
  
Alig confidence 

.










.









......................










..












Template Conservation 

 
  

 

 




 
  

  






  
 

   









 

  
      
 

      
Template Sequence  GLKTGRDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPVGVCVQDDKLRQKFVGTPEKVVNLFTFLAE
Template Known Secondary structure  S

STT
S

T





TTTT

TTSSS


TTGGGS



Template Predicted Secondary structure 



















Template SS confidence 








































































   1072.......1080.........1090.........1100.........1110.........1120.........1130.........1140....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions