Job Description P39364 Confidence 97.37% Date Thu Jan 5 11:59:55 GMT 2012 Rank 105 Aligned Residues 201 % Identity 8% Template c3tfxB_ PDB info PDB header:lyase Chain: B: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of orotidine 5'-phosphate decarboxylase from2 lactobacillus acidophilus Resolution 2.19 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.						.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.
Query Sequence		I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L	W	D	P	.	.	.	.	.	V	A	S	F	D	L	A	M	A	T	G
Query Conservation																																																																		.	.	.	.	.
Alig confidence																							.	.	.	.																	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation																							.	.	.	.																	.	.	.	.	.	.	.	.
Template Sequence		E	E	Q	L	N	K	I	L	S	K	L	G	D	P	H	D	V	F	V	K	V	.	.	.	.	G	X	E	L	F	Y	N	A	G	I	D	V	I	K	K	L	.	.	.	.	.	.	.	.	T	Q	Q	G	Y	K	I	F	L	D	L	K	X	H	D	I	P	N	T	V	Y	N	G	A	K	A	L	A	K	L	G
Template Known Secondary structure											T	T			G	G	G						.	.	.	.						T	T	S		T							.	.	.	.	.	.	.	.				T											S														T	T	T
Template Predicted Secondary structure																							.	.	.	.																	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50									.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		114	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.
Predicted Secondary structure							.																																																																				.
Query SS confidence							.																																																																				.
Query Sequence		A	K	F	I	R	.	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I	V	P	E	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	.	L	C	V	S	G	L
Query Conservation							.																																																																				.
Alig confidence							.									.	.	.	.	.	.	.	.	.																																																			.
Template Conservation																.	.	.	.	.	.	.	.	.
Template Sequence		I	T	F	T	T	V	H	A	L	G	G	S	Q	X	.	.	.	.	.	.	.	.	.	I	K	S	A	K	D	G	L	I	A	G	T	P	A	G	H	S	V	P	K	L	L	A	V	T	E	L	T	S	I	S	D	D	V	L	R	N	E	Q	N	C	R	L	P	X	A	E	Q	V	L	S	L	A	K	X	A	K
Template Known Secondary structure			S						G	G	G					.	.	.	.	.	.	.	.	.														T	T											S		T	T									T	S			S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.										.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		192	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure						.	.	.																																					.
Query SS confidence						.	.	.																																					.
Query Sequence		T	A	G	T	.	.	.	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I	.	A	D	G	C	V	T	A	T	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V	S	Q	F	M	E	K	V	H	H
Query Conservation						.	.	.																																					.
Alig confidence						.	.	.																																					.													.	.	.					.	.
Template Conservation																																																										.	.	.					.	.
Template Sequence		H	S	G	A	D	G	V	I	C	S	P	L	E	V	K	K	L	H	E	N	I	G	D	D	F	L	Y	V	T	P	G	I	R	P	A	T	P	K	X	A	K	E	W	G	S	S	A	I	V	V	G	R	P	I	T	L	.	.	.	A	S	D	P	.	.	K	A	A	Y	E	A	I	K	K	E	F	N	A
Template Known Secondary structure			T	T		S						T	T	T										S	S	S																		T	T		S										T	.	.	.	S	S	S		.	.
Template Predicted Secondary structure																																																										.	.	.					.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions