Job Description P39364 Confidence 97.77% Date Thu Jan 5 11:59:55 GMT 2012 Rank 89 Aligned Residues 87 % Identity 11% Template c3tdmD_ PDB info PDB header:de novo protein Chain: D: PDB Molecule:computationally designed two-fold symmetric tim-barrel PDBTitle: computationally designed tim-barrel protein, halfflr Resolution 2.40 Å

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		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240
Predicted Secondary structure																												.	.	.																														.												.
Query SS confidence																												.	.	.																														.												.
Query Sequence		G	N	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	.	.	.	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	.	C	L	E	N	V	E	E	Q	L	S	I	.	A	D	G	C	V	T	A	T	T
Query Conservation																												.	.	.																														.												.
Alig confidence																		.										.	.	.																			.											.												.
Template Conservation																		.																															.
Template Sequence		T	G	I	L	L	R	D	W	V	V	E	V	E	K	R	G	.	A	G	E	I	L	L	T	S	I	D	R	D	G	T	K	S	G	Y	D	T	E	M	I	R	F	V	R	P	L	T	.	T	L	P	I	I	A	S	G	G	A	G	K	M	E	H	F	L	E	A	F	L	R	G	A	D	K	V	S	I	N	T	A
Template Known Secondary structure																T	T	.		S							S	S	S		S	S	S	S											G	G	G		.		S						S				S										T	T		S					S
Template Predicted Secondary structure																		.																															.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V	S	Q	F	M	E	K
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.
Template Sequence		A	V	E	.	.	.	.	.	.	.	.	N	P	S	L	I	T	Q	I	A	Q	T
Template Known Secondary structure					.	.	.	.	.	.	.	.		T								T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.									.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions