Job Description P39364 Confidence 59.69% Date Thu Jan 5 11:59:55 GMT 2012 Rank 327 Aligned Residues 215 % Identity 11% Template c3si9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from bartonella2 henselae Resolution 2.10 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L
Query Conservation
Alig confidence																								.	.	.	.															.	.																													.
Template Conservation																								.	.	.	.															.	.																													.
Template Sequence		V	T	A	L	I	T	P	F	D	D	N	G	A	I	D	E	K	A	F	C	N	F	.	.	.	.	V	E	W	Q	I	T	Q	G	I	N	G	V	S	P	.	.	V	G	T	T	G	E	S	P	T	L	T	H	E	E	H	K	R	I	I	E	L	C	V	E	Q	V	A	K	.	R	V	P	V	V	A	G	A	G
Template Known Secondary structure									B		T	T	S		B									.	.	.	.							T	T		S					.	.	S	S	T	T	T	T	G	G	G																		T	T	.	S	S		B
Template Predicted Secondary structure																								.	.	.	.															.	.																													.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.
			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure		.																																																						.	.
Query SS confidence		.																																																						.	.
Query Sequence		.	W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	.	.	T	L	F	N	I	V	P	E	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S
Query Conservation		.																																																						.	.
Alig confidence		.															.	.	.	.																																				.	.
Template Conservation																	.	.	.	.
Template Sequence		S	N	S	T	S	E	A	V	E	L	A	K	H	A	E	.	.	.	.	K	A	G	A	D	A	V	L	V	V	T	P	Y	Y	N	R	P	N	Q	R	G	L	Y	T	H	F	S	S	I	A	K	A	I	S	I	P	I	I	I	Y	N	I	P	S	R	S	V	I	D	M	A	V	E	T	M	R	D	L	C	R	D
Template Known Secondary structure			S	S													.	.	.	.		T	T		S									S	S																			S	S												S	S
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		T	V	F	N	N	H	P	.	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I	A	D	G	C	V	T	A	T	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R
Query Conservation									.
Alig confidence									.			.	.	.	.	.	.	.	.	.	.																	.																													.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.																	.																													.	.	.	.	.	.	.	.	.
Template Sequence		F	K	N	I	I	G	V	K	D	A	.	.	.	.	.	.	.	.	.	.	T	G	K	I	E	R	A	S	E	Q	R	E	K	C	G	K	.	D	F	V	Q	L	S	G	D	D	C	T	A	L	G	F	N	A	H	G	G	V	G	C	I	S	V	S	S	.	.	.	.	.	.	.	.	.	N	V	A	P	K	L
Template Known Secondary structure			T	T								.	.	.	.	.	.	.	.	.	.	S			T												T	.	T	S					S		T	T	T								T							S	G	G	.	.	.	.	.	.	.	.	.	G	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																	.																													.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.											.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.										.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	Q	F	M	E	K	V	H	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	A	Q	L	H	A	A	C	L	C
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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