Job Description P39364 Confidence 97.78% Date Thu Jan 5 11:59:55 GMT 2012 Rank 88 Aligned Residues 197 % Identity 12% Template c3ru6C_ PDB info PDB header:lyase Chain: C: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: 1.8 angstrom resolution crystal structure of orotidine 5'-phosphate2 decarboxylase (pyrf) from campylobacter jejuni subsp. jejuni nctc3 11168 Resolution 1.80 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.						.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.
Query Sequence		I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L	W	D	P	V	A	.	.	.	.	.	S	F	D	L	A	M	A	T	G
Query Conservation																																																																				.	.	.	.	.
Alig confidence															.								.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template Conservation															.								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	E	C	L	Q	L	A	K	E	L	K	N	.	L	D	I	W	L	K	V	.	.	.	.	.	.	.	.	.	.	.	G	L	R	A	Y	L	R	D	G	F	K	F	I	E	E	L	K	K	V	D	D	F	K	I	F	L	D	L	K	F	H	D	I	P	N	T	M	A	D	A	C	E	E	V	S	K	L	G
Template Known Secondary structure												T	T	T	.	S	S						.	.	.	.	.	.	.	.	.	.	.																																S														T	T	T
Template Predicted Secondary structure															.								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.												.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I	V	P	E	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S	.	.	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L
Query Conservation																																																																	.	.
Alig confidence					.	.	.	.	.	.	.	.	.																																	.	.	.																	.	.
Template Conservation					.	.	.	.	.	.	.	.	.																																	.	.	.
Template Sequence		V	D	M	.	.	.	.	.	.	.	.	.	I	N	I	H	A	S	A	G	K	I	A	I	Q	E	V	M	T	R	L	S	K	F	S	K	R	P	L	V	L	A	V	S	.	.	.	A	L	T	S	F	D	E	E	N	F	F	S	I	Y	R	Q	K	I	E	E	A	V	I	N	F	S	K	I	S	Y	E	N	G
Template Known Secondary structure			S		.	.	.	.	.	.	.	.	.					G	G	G													T	T	S	S	S									.	.	.	S		T	T											S	S																T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.																																	.	.	.
Template SS confidence
		80	.	.										.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																		.	.									.
Query SS confidence																																		.	.									.
Query Sequence		T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	C	L	E	.	.	N	V	E	E	Q	L	S	I	.	A	D	G	C	V	T	A	T	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V	S	Q	F	M	E	K	V	H
Query Conservation																																		.	.									.
Alig confidence																																		.	.									.													.	.	.					.	.
Template Conservation																																																									.	.	.					.	.
Template Sequence		L	D	G	M	V	C	S	V	F	E	S	K	K	I	K	E	H	T	S	S	N	F	L	T	L	T	P	G	I	R	P	F	G	A	N	L	A	M	A	R	E	N	L	S	D	Y	I	V	V	G	R	P	I	Y	K	.	.	.	N	E	N	P	.	.	R	A	V	C	E	K	I	L	N	K	I	H
Template Known Secondary structure									T	T	T								S		T	T	S						S			T	T										T	T		S										T	.	.	.	S	S			.	.
Template Predicted Secondary structure																																																									.	.	.					.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions