Return to main results Retrieve Phyre Job Id

Job DescriptionP39364
Confidence21.78%DateThu Jan 5 11:59:55 GMT 2012
Rank398Aligned Residues79
% Identity13%Templatec3qxbB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:putative xylose isomerase; PDBTitle: crystal structure of a putative xylose isomerase (yp_426450.1) from2 rhodospirillum rubrum atcc 11170 at 1.90 a resolution
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20........ .30.........40.........50.........60.........70.......
Predicted Secondary structure 













......





















Query SS confidence 
























. . . . . .
















































Query Sequence  LKEVIGTEKAVIAMCHLRALPGDPS. . . . . . FDAQLGMNWVIDKAWDDLMALQNGGVDAVMFSNEFSLPYLTKVRPETTA
Query Conservation 
   
   
  

 


 



 
 ......           
 
  

  
 
 








    
           
Alig confidence 
























......










.......























.





Template Conservation             
  


 
     
      
 
 

     .......  
   

 
     
     
  .      
Template Sequence  XDHWXDLCQPWIAAYHIQQTDGQLDRHWSFTQPGVVTPQRLQ. . . . . . . DFWDKYALTDQTFFAEILYPFEAR. DEDVLA
Template Known Secondary structure  GGG
B

SSS


B
TTS
SS

.......TT
SS






TTS
.
Template Predicted Secondary structure 



















.......












.
Template SS confidence 















































































   210.........220.........230.........240.........250. ........260.........270..... ....280.
 
   78.80.........90
Predicted Secondary structure 

Query SS confidence 












Query Sequence  AMARIIGQLMSDI
Query Conservation      

  
    
Alig confidence 












Template Conservation     

   
    
Template Sequence  DXIASVKALKAAS
Template Known Secondary structure  T

Template Predicted Secondary structure 
Template SS confidence 












   282.......290....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions