Job Description P39364 Confidence 73.92% Date Thu Jan 5 11:59:55 GMT 2012 Rank 292 Aligned Residues 225 % Identity 15% Template c3qfwB_ PDB info PDB header:lyase Chain: B: PDB Molecule:ribulose-1,5-bisphosphate carboxylase/oxygenase large PDBTitle: crystal structure of rubisco-like protein from rhodopseudomonas2 palustris Resolution 1.79 Å

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		4	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																																																			.	.	.
Query SS confidence								.																																																			.	.	.
Query Sequence		L	K	E	V	I	G	.	T	E	K	A	V	I	A	M	C	H	L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	.	.	.	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M
Query Conservation								.																																																			.	.	.
Alig confidence								.										.					.		.	.	.	.	.	.	.										.	.	.	.											.	.			.	.	.										.	.
Template Conservation																		.					.		.	.	.	.	.	.	.										.	.	.	.											.	.															.	.
Template Sequence		I	R	T	L	T	G	A	Q	S	R	A	L	T	A	S	A	.	L	K	P	Q	.	G	.	.	.	.	.	.	.	L	S	P	A	A	L	A	S	I	.	.	.	.	A	H	Q	L	A	L	G	G	V	D	.	.	L	I	K	D	D	H	G	L	A	D	Q	A	F	S	.	.	P	F	A	E	R	A	A	A	V
Template Known Secondary structure							T		S	S	S							.				T	.	T	.	.	.	.	.	.	.	S									.	.	.	.							T	T		S	.	.						T	T		S	S		T	T	S	.	.
Template Predicted Secondary structure																		.					.		.	.	.	.	.	.	.										.	.	.	.											.	.															.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.		.								.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		A	R	I	I	G	Q	L	M	S	D	I	.	R	I	P	F	G	V	N	V	L	W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I	V
Query Conservation													.
Alig confidence													.																		.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	A	V	R	E	A	N	A	A	R	G	G	R	T	L	Y	A	P	N	I	S	G	T	L	D	D	M	R	.	.	.	.	.	.	.	.	.	.	R	Q	L	G	V	I	R	D	E	G	I	G	A	V	L	V	A	P	M	I	V	G	V	S	N	F	H	A	I	V	K	E	A	A	G	L	V	V	V	A	H
Template Known Secondary structure													T								B			S	S						.	.	.	.	.	.	.	.	.	.										T																					T	T		T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.											.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																							.	.	.	.	.				.	.
Query SS confidence																																																							.	.	.	.	.				.	.
Query Sequence		P	E	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	.	.	.	.	.	T	V	V	.	.	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I
Query Conservation																																																							.	.	.	.	.				.	.
Alig confidence																									.																														.	.	.	.	.				.	.
Template Conservation																									.
Template Sequence		P	A	M	A	G	A	A	K	I	A	A	P	L	L	L	G	R	L	F	R	L	F	G	.	A	D	A	T	V	F	P	N	Y	G	G	R	F	A	Y	S	T	A	S	C	L	A	L	A	Q	A	A	R	D	P	F	G	K	L	N	A	C	I	P	T	P	A	G	G	I	M	L	Q	R	V	N	E	L	L	R	F
Template Known Secondary structure			T	T	T	T	S	S		B							T							T	.		S							T	T	S	S	S																S			T	T										S	S			T	T	T
Template Predicted Secondary structure																									.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
				232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	D	G	C	V	T	A	T	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V	S	Q	F	M	E	K	V	H	H	I	R	R
Query Conservation		.	.
Alig confidence		.	.								.	.	.	.	.	.	.	.	.	.		.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.		.	.
Template Sequence		Y	G	Q	D	V	M	L	L	I	.	.	.	.	.	.	.	.	.	.	R	.	.	L	T	E	Q	A	S	R	F	V	N	K	V	A	D	Y	G	Q
Template Known Secondary structure				S	S						.	.	.	.	.	.	.	.	.	.		.	.															T	T	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.		.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.											.			.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions