Job Description P39364 Confidence 99.48% Date Thu Jan 5 11:59:55 GMT 2012 Rank 16 Aligned Residues 195 % Identity 8% Template c3qc3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:d-ribulose-5-phosphate-3-epimerase; PDBTitle: crystal structure of a d-ribulose-5-phosphate-3-epimerase (np_954699)2 from homo sapiens at 2.20 a resolution Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																										.	.	.						.	.																													.	.	.
Query SS confidence																										.	.	.						.	.																													.	.	.
Query Sequence		W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	.	.	.	Y	L	T	K	V	.	.	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L	.	.	.	W	D	P	V	A	S	F	D	L	A	M	A	T	G	A
Query Conservation																										.	.	.						.	.																													.	.	.
Alig confidence																			.	.	.	.				.	.	.						.	.					.	.	.	.	.	.	.																		.	.	.
Template Conservation																			.	.	.	.																		.	.	.	.	.	.	.
Template Sequence		G	A	E	C	L	R	X	L	D	S	G	A	D	Y	L	H	L	.	.	.	.	D	V	X	D	G	H	F	V	P	N	I	T	F	G	H	P	V	.	.	.	.	.	.	.	V	E	S	L	R	K	Q	L	G	Q	D	P	F	F	D	X	H	X	X	V	S	K	P	E	Q	W	V	K	P	X	A	V	A	G	A
Template Known Secondary structure											T	T		S					.	.	.	.				B	S	S	S	S	S		B							.	.	.	.	.	.	.										S	S	S									S													T
Template Predicted Secondary structure																			.	.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.								.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I	V	P	E	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	.	L	C	V	S	G	L	T	A
Query Conservation																																																																									.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																															.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Sequence		N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	T	F	H	L	E	A	T	E	N	P	G	A	L	I	K	D	I	R	E	N	G	X	.	.	K	V	G	L	A	I	K	P	G	T	S	V	E	Y	L	A	P	W	A	N	Q	I	D	X	A	L	V	X	T	V	E	P	G	F	G	G	Q	K	F
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G		S												T	T		.	.								T	T	S		G	G	G	G	T	T	T	G	G	G	S	S						S	S		T	T		S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template SS confidence
		89															90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I	.	A	D	G	C	V	T	A	T	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V	S	Q	F	M	E	K	V	H	H	I	R
Query Conservation																																								.
Alig confidence		.																																						.																			.	.
Template Conservation		.																																																									.	.
Template Sequence		.	X	E	D	X	X	P	K	V	H	W	L	R	T	Q	F	P	S	L	D	I	E	V	D	G	G	V	G	P	D	T	V	H	K	C	A	E	A	G	A	N	X	I	V	S	G	S	A	I	X	R	S	E	D	P	R	S	.	.	V	I	N	L	L	R	N	V	C	S	E	A	A	Q	K	R
Template Known Secondary structure		.		G	G	G												T	T							S	S		S	T	T	T								T												T		S					.	.
Template Predicted Secondary structure		.																																																									.	.
Template SS confidence
			153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions