Job Description P39364 Confidence 77.60% Date Thu Jan 5 11:59:55 GMT 2012 Rank 281 Aligned Residues 157 % Identity 11% Template c3noyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: crystal structure of ispg (gcpe) Resolution 2.70 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L	W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Sequence		V	E	A	T	L	N	Q	I	K	R	L	Y	E	A	G	C	E	I	V	R	V	A	V	P	H	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	D	V	E	A	L	E	E	I	V	K	K	S	P	M	P	V	I	A	D	I	H	F	A	P	S	Y	A	F	L	.	S	M	E	K	G	V	H	G	I	R
Template Known Secondary structure															T	T										S	.	.	.	.	.	.	.	.	.	.	.	.	.															S	S								S								.				T	T		S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60														.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.
			119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																							.	.	.	.	.																.	.	.
Query SS confidence		.																																							.	.	.	.	.																.	.	.
Query Sequence		.	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	.	.	.	.	.	I	V	P	E	A	A	V	Y	L	G	N	R	D	I	C	.	.	.	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S
Query Conservation		.																																							.	.	.	.	.																.	.	.
Alig confidence		.		.	.	.	.	.	.																																.	.	.	.	.																.	.	.														.
Template Conservation				.	.	.	.	.	.																																																																				.
Template Sequence		I	N	.	.	.	.	.	.	P	G	N	I	G	K	E	E	I	V	R	E	I	V	E	E	A	K	R	R	G	V	A	V	R	I	G	V	N	S	G	S	L	E	K	D	L	L	E	K	Y	G	Y	P	S	A	E	A	L	A	E	S	A	L	R	W	S	E	K	F	E	K	W	G	F	T	N	.	Y	K	V	S
Template Known Secondary structure				.	.	.	.	.	.					S																T									G	G	G										S	S																				T	T				.
Template Predicted Secondary structure				.	.	.	.	.	.																																																																				.
Template SS confidence
		102	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		I	K	G	S	D	V	L	Q	N	V	R	A	N	L	I	F	A	E	R	T	.	D	V	P	L	H	I	G
Template Known Secondary structure					S	S																.
Template Predicted Secondary structure																						.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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