Job Description P39364 Confidence 43.15% Date Thu Jan 5 11:59:55 GMT 2012 Rank 354 Aligned Residues 216 % Identity 13% Template c3na8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of a putative dihydrodipicolinate synthetase from2 pseudomonas aeruginosa Resolution 1.85 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L
Query Conservation
Alig confidence																								.	.	.	.															.	.																													.
Template Conservation																								.	.	.	.															.	.																													.
Template Sequence		I	G	Y	T	I	T	P	F	A	A	D	G	G	L	D	L	P	A	L	G	R	S	.	.	.	.	I	E	R	L	I	D	G	G	V	H	A	I	A	P	.	.	L	G	S	T	G	E	G	A	Y	L	S	D	P	E	W	D	E	V	V	D	F	T	L	K	T	V	A	H	.	R	V	P	T	I	V	S	V	S
Template Known Secondary structure									B		T	T	S	S	B									.	.	.	.							T	T		S					.	.	S	S	G	G	G	T	G	G	G	S																	T	T	.	S	S		B
Template Predicted Secondary structure																								.	.	.	.															.	.																													.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.
		100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure					.																																																											.
Query SS confidence					.																																																											.
Query Sequence		W	D	P	.	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I	V	P	E	.	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S	T
Query Conservation					.																																																											.
Alig confidence					.																			.	.	.																																						.
Template Conservation																								.	.	.
Template Sequence		D	L	T	T	A	K	T	V	R	R	A	Q	F	A	E	S	L	G	A	E	A	V	.	.	.	X	V	L	P	I	S	Y	W	K	L	N	E	A	E	V	F	Q	H	Y	R	A	V	G	E	A	I	G	V	P	V	X	L	Y	N	N	P	G	T	S	G	I	D	X	S	V	E	L	I	L	R	I	V	R	E	V
Template Known Secondary structure			S	S														T	T		S			.	.	.							S	S																			S	S												S															S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I	A	D	G	C	V	T	A	T	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V	S
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.																									.	.																					.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.																									.	.																					.	.	.	.	.	.	.	.	.
Template Sequence		D	N	V	T	X	V	K	E	.	.	.	.	.	.	.	.	.	S	T	G	D	I	Q	R	X	H	K	L	R	L	L	G	E	G	R	V	P	F	Y	N	G	.	.	N	P	L	A	L	E	A	F	V	A	G	A	K	G	W	C	S	A	A	P	.	.	.	.	.	.	.	.	.	N	L	I	P	T	L	N	G
Template Known Secondary structure		T	T							.	.	.	.	.	.	.	.	.		S	S												T	T	T		S						.	.		T	T								T		S					S	G	G	.	.	.	.	.	.	.	.	.	G	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																									.	.																					.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.										.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230										.	.	.	.	.	.	.	.
		258	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	M	E	K	V	H	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	Y	Q	A	V	L	D
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions