Job Description P39364 Confidence 92.13% Date Thu Jan 5 11:59:55 GMT 2012 Rank 209 Aligned Residues 222 % Identity 12% Template c3lerA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 campylobacter jejuni subsp. jejuni nctc 11168 Resolution 1.84 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	E	K	A	V	I	A	M	C	H	L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S
Query Conservation
Alig confidence												.	.	.																					.	.	.	.															.	.
Template Conservation												.	.	.																					.	.	.	.															.	.
Template Sequence		X	D	K	N	I	I	I	G	A	X	.	.	.	T	A	L	I	T	P	F	K	N	G	K	V	D	E	Q	S	Y	A	R	L	.	.	.	.	I	K	R	Q	I	E	N	G	I	D	A	V	V	P	.	.	V	G	T	T	G	E	S	A	T	L	T	H	E	E	H	R	T	C	I	E	I	A	V	E	T	C	K
Template Known Secondary structure												.	.	.									T	T											.	.	.	.						T	T	T						T	.	.	T	S	T	T	T	T	G	G	G	S																	T
Template Predicted Secondary structure												.	.	.																					.	.	.	.															.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		89	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.
Predicted Secondary structure														.																																															.															.
Query SS confidence														.																																															.															.
Query Sequence		D	I	R	I	P	F	G	V	N	V	L	W	.	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	.	G	A	G	E	V	K	T	L	F	N	I	V	P	E	.	A	A	V	Y	L
Query Conservation														.																																															.															.
Alig confidence														.														.	.	.	.																														.															.
Template Conservation																												.	.	.	.
Template Sequence		G	T	K	V	K	V	L	A	G	A	G	S	N	A	T	H	E	A	V	G	L	A	K	F	A	K	.	.	.	.	E	H	G	A	D	G	I	L	S	V	A	P	Y	Y	N	K	P	T	Q	Q	G	L	Y	E	H	Y	K	A	I	A	Q	S	V	D	I	P	V	L	L	Y	N	V	P	G	R	T	G	C	E	I
Template Known Secondary structure		T	S	S										S	S													.	.	.	.		T	T		S									S	S																			S	S												S
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		G	N	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I	.	A	D	G	C	V	T	A	T	T	F	K	K	D
Query Conservation																																																																				.
Alig confidence																						.	.	.	.	.	.	.	.	.	.																									.	.	.										.										.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.																									.	.	.																				.	.	.	.
Template Sequence		S	T	D	T	I	I	K	L	F	R	D	C	E	N	I	Y	G	V	E	A	.	.	.	.	.	.	.	.	.	.	S	G	N	I	D	K	C	V	D	L	L	A	H	E	P	R	X	X	L	I	S	G	E	D	.	.	.	A	I	N	Y	P	I	L	S	N	G	G	K	G	V	I	S	V	T	S	.	.	.	.
Template Known Secondary structure														T	T							.	.	.	.	.	.	.	.	.	.	S	S													T	T	S	B						G	.	.	.	G	G							T	T							S	G	G	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																									.	.	.																				.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.											.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	F	A	N	F	V	D	Q	A	R	V	S	Q	F	M	E	K	V	H	H
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	N	L	L	P	D	X	I	S	A	L	T	H	F	A	L	D
Template Known Secondary structure		.	.	.	.	.	G	T														T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions