Job Description P39364 Confidence 73.98% Date Thu Jan 5 11:59:55 GMT 2012 Rank 290 Aligned Residues 216 % Identity 17% Template c3lciA_ PDB info PDB header:lyase Chain: A: PDB Molecule:n-acetylneuraminate lyase; PDBTitle: the d-sialic acid aldolase mutant v251w Resolution 2.12 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	C	H	L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G
Query Conservation
Alig confidence															.	.												.	.	.	.															.	.																													.
Template Conservation															.	.												.	.	.	.															.	.																													.
Template Sequence		G	V	M	A	A	L	L	T	P	F	D	Q	Q	.	.	Q	A	L	D	K	A	S	L	R	R	L	.	.	.	.	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	.	.	G	G	S	T	G	E	A	F	V	Q	S	L	S	E	R	E	Q	V	L	E	I	V	A	E	E	A	K	G	.	K	I	K	L	I
Template Known Secondary structure		S									B		T	T	.	.	S		B									.	.	.	.							T	T		S					.	.	S	S	G	G	G	T	G	G	G	S																	T	T	.	T	S
Template Predicted Secondary structure															.	.												.	.	.	.															.	.																													.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.
		96	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure							.																																															.	.														.
Query SS confidence							.																																															.	.														.
Query Sequence		V	N	V	L	W	.	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	.	.	G	A	G	E	V	K	T	L	F	N	I	V	P	.	E	A	A	V	Y	L	G	N	R	D	I	C
Query Conservation							.																																															.	.														.
Alig confidence							.														.	.	.	.																														.	.														.
Template Conservation																					.	.	.	.
Template Sequence		A	H	V	G	C	V	S	T	A	E	S	Q	Q	L	A	A	S	A	K	.	.	.	.	R	Y	G	F	D	A	V	S	A	V	T	P	F	Y	Y	P	F	S	F	E	E	H	C	D	H	Y	R	A	I	I	D	S	A	D	G	L	P	M	V	V	Y	N	I	P	A	L	S	G	V	K	L	T	L	D	Q	I	N
Template Known Secondary structure							S	S													.	.	.	.			T		S									S	S																		T	T	T
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I	A	D	G	C	V	T	A	T	T	F	K	K	D	G	V	F	A	N	F	V
Query Conservation
Alig confidence						.										.	.	.	.	.	.	.	.	.																												.	.																		.	.	.	.	.	.	.	.	.
Template Conservation						.										.	.	.	.	.	.	.	.	.																												.	.																		.	.	.	.	.	.	.	.	.
Template Sequence		T	L	V	T	.	L	P	G	V	G	A	L	K	Q	.	.	.	.	.	.	.	.	.	T	S	G	D	L	Y	Q	M	E	Q	I	R	R	E	H	P	D	L	V	L	Y	N	G	Y	D	E	I	.	.	F	A	S	G	L	L	A	G	A	D	G	G	I	G	S	T	Y	.	.	.	.	.	.	.	.	.	N	I
Template Known Secondary structure					T	.	S	T	T							.	.	.	.	.	.	.	.	.																T	T								G	G	G	.	.								T							T	T		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.										.	.	.	.	.	.	.	.	.																												.	.																		.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.		.	.	160	.	.	.	.	.	.										.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210										.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	A	R	V	S	Q	F	M	E	K	V	H	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	G	W	R	Y	Q	G	I	V	K	A	L	K	E
Template Known Secondary structure															T
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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