Job Description P39364 Confidence 62.85% Date Thu Jan 5 11:59:55 GMT 2012 Rank 321 Aligned Residues 230 % Identity 9% Template c3ijdB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: uncharacterized protein cthe_2304 from clostridium2 thermocellum binds two copies of 5-methyl-5,6,7,8-3 tetrahydrofolic acid Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	K	E	V	I	G	T	E	K	A	V	I	A	M	C	H	L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I
Query Conservation
Alig confidence																						.	.	.	.	.	.	.																															.	.	.										.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.																															.	.	.										.	.	.	.	.	.	.
Template Sequence		L	K	Q	K	I	L	N	R	E	S	G	I	I	T	Y	G	I	T	P	P	.	.	.	.	.	.	.	K	K	N	N	T	E	E	K	I	K	E	I	S	Q	K	H	I	E	R	I	S	G	L	D	I	D	G	L	V	I	.	.	.	Y	D	L	Q	I	E	T	I	D	.	.	.	.	.	.	.	P	Q	I	Y
Template Known Secondary structure								T	T		S											.	.	.	.	.	.	.	B	S	S	S																		T				S					.	.	.							B			.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.																															.	.	.										.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.								.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60								.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.																																																			.
Query SS confidence																	.	.	.																																																			.
Query Sequence		I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	.	.	.	V	L	W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	.	A	G	E	V	K	T	L	F	N	I	V
Query Conservation																	.	.	.																																																			.
Alig confidence																	.	.	.																										.	.	.	.						.	.															.
Template Conservation																																													.	.	.	.						.	.
Template Sequence		S	E	N	Y	L	K	D	L	K	I	P	K	I	I	Y	R	C	V	G	K	Y	T	P	D	E	F	R	R	L	T	R	P	V	S	G	Q	D	A	F	S	V	F	V	.	.	.	.	G	A	A	V	L	.	.	L	K	L	S	D	A	Y	K	I	R	Q	D	V	N	P	D	L	L	L	G	G	V	A	I	P	E
Template Known Secondary structure							T	T	S		S								G	G	G	S										S			T	T									.	.	.	.						.	.	S														T	T	S
Template Predicted Secondary structure																																													.	.	.	.						.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210										.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.											.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.											.	.
Query Sequence		P	E	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	.	.	.	.	.	.	.	.	.	D	T	V	V	L	A	N	T	G	V	.	.	C	L	E	N	V	E	E
Query Conservation																																																						.	.	.	.	.	.	.	.	.											.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.											.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.
Template Sequence		R	H	M	K	N	T	D	E	H	L	R	I	I	D	K	I	N	K	G	C	K	Y	F	I	.	.	.	.	.	.	.	.	.	.	T	Q	A	V	Y	N	V	E	A	A	K	D	F	L	S	D	Y	Y	Y	Y	S	K	N	N	N	L	K	M	V	P	I	I	F	T	L	T	P	C	G	S	T	K	T	L	E	F
Template Known Secondary structure							S												T	T						.	.	.	.	.	.	.	.	.	.		S																						T	T															S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.											.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	S	I	A	D	G	C	V	T	A	T	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V	S	Q	F	M	E	K	V	H	H	I	R
Query Conservation
Alig confidence			.				.
Template Conservation			.				.
Template Sequence		M	.	K	W	L	.	G	I	S	I	P	R	W	L	E	N	D	L	M	N	C	E	D	I	L	N	K	S	V	S	L	S	K	S	I	F	N	E	L	M
Template Known Secondary structure			.				.	T													T	T
Template Predicted Secondary structure			.				.
Template SS confidence
		228		.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions