 |
Job Description | P39364 | Confidence | 95.86% | Date | Thu Jan 5 11:59:55 GMT 2012 |
Rank | 150 | Aligned Residues | 64 |
% Identity | 19% | Template | c3gvgA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:triosephosphate isomerase; |
PDBTitle: crystal structure of triosephosphate isomerase from mycobacterium2 tuberculosis
|
Resolution | 1.55 Å |
|
 |
  |   |
193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | |
|
. | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | T | R | T | D | S | A | L | L | K | R | V | K | E | T | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | D | T | V | V | L | A | N | T | G | V | C | L | E | N | V | E | E | Q | L | S | I | . |
. |
A | D | G | C | V | T | A | T | T | F | K | K | D | G | V | F | A | N | F | V | D | Q | A | R | V | S |
Query Conservation |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   | . | . |
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|   |
|   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|   |
|
|
|   |
| . | . | . | . | . | . | . | . | . |
|
|   |   |   |   |
|   |
Template Sequence |   |
T | G | R | V | A | S | A | A | D | A | Q | E | V | C | A | A | I | R | K | E | L | A | S | L | A | S | P | R | I | A | D | T | V | R | V | L | Y | G | G | S | V | N | A | K | N | V | G | D | I | V | A | Q | D | D | V | D | G | G | L | V | G | G | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
S | L | D | G | E | H | F | A |
Template Known Secondary structure |   |
S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  | T | T |
|
|  |  |  |
| S |
|
|
| T | T | T |  |  |  |  |  | T | S | T | T |
|
|  |  |  |  |
| G | G | . | . | . | . | . | . | . | . | . | G | G | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|  |  | . | . | . | . | . | . | . | . | . |  |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . |
  |
  |   |
258 | . | 260 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | F | M | E | K | V | H | H |
Query Conservation |   |
  |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |
|
Template Sequence |   |
T | L | A | A | I | A | A | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
250 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|