Job Description P39364 Confidence 98.22% Date Thu Jan 5 11:59:55 GMT 2012 Rank 69 Aligned Residues 169 % Identity 11% Template c3gr7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadph dehydrogenase; PDBTitle: structure of oye from geobacillus kaustophilus, hexagonal2 crystal form Resolution 2.30 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.															.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	E	E	T	V	Q	A	F	Q	N	G	A	R	R	A	K	E	A	G	F	D	V	I	E	I	H	A	A	H	G	Y	L	I	N	E	F	L	S	P	L	S	N	R	R	Q	D	E	Y	G	G	S	P	E	N	R	Y	R	F	L	G	E	V	I	D	A	V	R	E	V	W	D	G	P	L	F	V	R	I	S
Template Known Secondary structure																					T		S								T	T									T	T	T					S	T	T	S	S	S																					S
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I	V	P	E	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S	T	V	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	D	Y	H	P	D	G	L	T	A	K	D	Y	V	P	Y	A	K	R	M	K	E	Q	G	V	.	.	.	.	.	.	.	D	L	V	D	V	S	S	G	A	I	V	P	A	R	M	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S				S	T	T	S			G	G	G											T	T		.	.	.	.	.	.	.										S	S					.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template SS confidence
																									218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.								.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																																											.												.	.
Query SS confidence																																											.												.	.
Query Sequence		N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	.	C	L	E	N	V	E	E	Q	L	S	I	.	.	A	D	G	C	V	T	A	T	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V
Query Conservation																																											.												.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																													.												.	.													.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	Y	P	G	Y	Q	V	P	F	A	E	L	I	R	R	E	A	D	I	P	T	G	A	V	G	L	I	T	S	G	W	Q	A	E	E	I	L	Q	N	G	R	A	D	L	V	F	L	G	R	E	L	L	R	.	.	.	.	.	.	.	.	N	P	Y	W	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T	T											T	T							S	S													T	T	S		S											.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.
Template SS confidence
															259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.									.	.	.	.	.
		257	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	F	M	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	A	A	R	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions