Job Description P39364 Confidence 80.73% Date Thu Jan 5 11:59:55 GMT 2012 Rank 271 Aligned Residues 227 % Identity 12% Template c3g0sA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from salmonella typhimurium lt2 Resolution 1.85 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L
Query Conservation
Alig confidence																								.	.	.	.															.	.																													.
Template Conservation																								.	.	.	.															.	.																													.
Template Sequence		I	V	A	L	V	T	P	M	D	E	K	G	N	V	S	R	S	C	L	K	K	L	.	.	.	.	I	D	Y	H	V	A	N	G	T	S	A	I	V	S	.	.	V	G	T	T	G	E	S	A	T	L	S	H	D	E	H	G	D	V	V	M	M	T	L	E	L	A	D	G	.	R	I	P	V	I	A	G	T	G
Template Known Secondary structure									B		T	T	S		B									.	.	.	.							T	T							.	.	S	S	T	T	T	T	G	G	G	S																	T	T	.	S	S
Template Predicted Secondary structure																								.	.	.	.															.	.																													.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.
		100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure					.																																													.						.
Query SS confidence					.																																													.						.
Query Sequence		W	D	P	.	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	.	G	A	G	E	V	.	K	T	L	F	N	I	V	P	E	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S
Query Conservation					.																																													.						.
Alig confidence					.												.	.	.	.																														.						.
Template Conservation																	.	.	.	.
Template Sequence		A	N	A	T	A	E	A	I	S	L	T	Q	R	F	N	.	.	.	.	D	S	G	I	V	G	C	L	T	V	T	P	Y	Y	N	R	P	T	Q	E	G	L	F	Q	H	F	K	A	I	A	E	H	T	D	L	P	Q	I	L	Y	N	V	P	S	R	T	G	C	D	M	L	P	E	T	V	G	R	L	A	E	I
Template Known Secondary structure			S	S										T	T	T	.	.	.	.	T	S	S											S	S																	T		S	S												S													T	S
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240							.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																																																		.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.
Query Sequence		T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I	A	D	G	C	V	T	A	T	T	.	.	.	.	.	.	F	K	K	D	G	V	F	A	N	F
Query Conservation																																																																		.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																	.																													.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		K	N	I	I	A	I	K	E	A	.	.	.	.	.	.	.	.	.	.	T	G	N	L	T	R	V	H	Q	I	K	E	L	V	S	D	.	D	F	I	L	L	S	G	D	D	A	S	A	L	D	F	M	Q	L	G	G	H	G	V	I	S	V	T	A	N	V	A	A	R	E	M	A	D	M	C	K	L	A	A	E
Template Known Secondary structure		T	T								.	.	.	.	.	.	.	.	.	.	S			T	T							T	T	S		T	.	T						S		G	G	G							T	T							S	G	G	G	T														T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		155	.	.	.	.	160	.	.	.											.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	Q	A	R	V	S	Q	F	M	E	K	V	H	H	I	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	F	A	E	A	R	A	I	N	Q	R	L	M	P	L	H	N
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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