Job Description P39364 Confidence 28.68% Date Thu Jan 5 11:59:55 GMT 2012 Rank 376 Aligned Residues 217 % Identity 13% Template c3fluD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from the pathogen2 neisseria meningitidis Resolution 2.00 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	C	H	L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G
Query Conservation
Alig confidence														.	.													.	.	.	.															.	.																													.
Template Conservation														.	.													.	.	.	.															.	.																													.
Template Sequence		G	S	L	V	A	L	I	T	P	M	N	Q	.	.	D	G	S	I	H	Y	E	Q	L	R	D	L	.	.	.	.	I	D	W	H	I	E	N	G	T	D	G	I	V	A	.	.	V	G	T	T	G	E	S	A	T	L	S	V	E	E	H	T	A	V	I	E	A	V	V	K	H	V	A	K	.	R	V	P	V	I
Template Known Secondary structure											B		T	.	.	T	S		B									.	.	.	.							T	T							.	.	S	S	T	T	T	T	G	G	G	S																	T	T	.	S	S
Template Predicted Secondary structure														.	.													.	.	.	.															.	.																													.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.
		96	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure							.																																															.						.
Query SS confidence							.																																															.						.
Query Sequence		V	N	V	L	W	.	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	.	G	A	G	E	V	.	K	T	L	F	N	I	V	P	E	A	A	V	Y	L	G	N	R	D	I	C	S
Query Conservation							.																																															.						.
Alig confidence							.														.	.	.	.																														.						.
Template Conservation																					.	.	.	.
Template Sequence		A	G	T	G	A	N	N	T	V	E	A	I	A	L	S	Q	A	A	E	.	.	.	.	K	A	G	A	D	Y	T	L	S	V	V	P	Y	Y	N	K	P	S	Q	E	G	I	Y	Q	H	F	K	T	I	A	E	A	T	S	I	P	M	I	I	Y	N	V	P	G	R	T	V	V	S	M	T	N	D	T	I	L	R
Template Known Secondary structure							S	S													.	.	.	.			T		S									S	S																	T			S												S	S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I	A	D	G	C	V	T	A	T	T	F	K	K	D	G	V	F	A	N	F	V	D
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.																	.																													.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.																	.																													.	.	.	.	.	.	.	.	.
Template Sequence		L	A	E	I	P	N	I	V	G	V	K	E	A	.	.	.	.	.	.	.	.	.	.	S	G	N	I	G	S	N	I	E	L	I	N	R	A	P	E	.	G	F	V	V	L	S	G	D	D	H	T	A	L	P	F	M	L	C	G	G	H	G	V	I	T	V	A	A	.	.	.	.	.	.	.	.	.	N	A	A
Template Known Secondary structure			T	T	S	T	T								.	.	.	.	.	.	.	.	.	.	S													S		T	.	T								G	G	G							T	T							S	G	G	.	.	.	.	.	.	.	.	.	G	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																	.																													.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.											.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.										.	.	210
		253	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	R	V	S	Q	F	M	E	K	V	H	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	L	F	A	D	M	C	R	A	A	L	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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