Job Description P39364 Confidence 53.07% Date Thu Jan 5 11:59:55 GMT 2012 Rank 344 Aligned Residues 219 % Identity 12% Template c3fkkA_ PDB info PDB header:lyase Chain: A: PDB Molecule:l-2-keto-3-deoxyarabonate dehydratase; PDBTitle: structure of l-2-keto-3-deoxyarabonate dehydratase Resolution 2.10 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L
Query Conservation
Alig confidence																								.	.	.	.															.	.																													.
Template Conservation																								.	.	.	.															.	.																													.
Template Sequence		F	P	V	V	P	T	T	F	A	D	T	G	D	L	D	L	A	S	Q	K	R	A	.	.	.	.	V	D	F	M	I	D	A	G	S	D	G	L	C	I	.	.	L	A	N	F	S	E	Q	F	A	I	T	D	D	E	R	D	V	L	T	R	T	I	L	E	H	V	A	G	.	R	V	P	V	I	V	T	T	S
Template Known Secondary structure				B					B		T	T	S	S	B									.	.	.	.							T	T		S					.	.	S	S	G	G	G	T	G	G	G	S																	T	T	.	S	S
Template Predicted Secondary structure																								.	.	.	.															.	.																													.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.
		100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		W	.	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I	V	P	E	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S	T	V
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		H	Y	S	T	Q	V	C	A	A	R	S	L	R	A	Q	Q	L	G	A	A	M	V	M	A	M	P	P	Y	H	G	A	T	F	R	V	P	E	A	Q	I	F	E	F	Y	A	R	V	S	D	A	I	A	I	P	I	M	V	Q	D	A	P	A	S	G	T	A	L	S	A	P	F	L	A	R	M	A	R	E	I	E
Template Known Secondary structure			S															T	T		S							S		B	T	T	T	B																			S	S								G	G	G																S	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		179	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure							.																																																	.
Query SS confidence							.																																																	.
Query Sequence		F	N	N	H	P	.	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I	.	A	D	G	C	V	T	A	T	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V
Query Conservation							.																																																	.
Alig confidence							.			.	.	.	.	.	.	.	.	.																																						.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	A	Y	F	K	I	E	.	.	.	.	.	.	.	.	.	T	P	G	A	A	N	K	L	R	E	L	I	R	L	G	G	D	A	I	E	G	P	W	D	G	E	E	A	I	T	L	L	A	D	L	H	A	G	A	T	G	A	M	T	G	G	G	F	.	.	.	.	.	.	.	.	.	.	.	P	D	G	I
Template Known Secondary structure		T								.	.	.	.	.	.	.	.	.	S	T	T													G	G	G								G	G	G	T	T							T	T								S	S		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.										.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.												.	.	.	.
		257	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	F	M	E	K	V	H	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	I	L	E	A	W	R	E
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions