Job Description P39364 Confidence 91.25% Date Thu Jan 5 11:59:55 GMT 2012 Rank 214 Aligned Residues 205 % Identity 15% Template c3ez4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-methyl-2-oxobutanoate hydroxymethyltransferase; PDBTitle: crystal structure of 3-methyl-2-oxobutanoate2 hydroxymethyltransferase from burkholderia pseudomallei Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		S	W	L	K	E	V	I	G	T	E	K	A	V	I	A	M	C	H	L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	.	.	.	.	.	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T
Query Conservation																																																												.	.	.	.	.
Alig confidence																.					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.																	.
Template Conservation																.					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Sequence		P	K	L	Q	A	M	R	E	A	G	E	K	I	A	.	M	L	T	S	.	.	.	.	.	.	.	.	Y	D	A	S	F	.	.	.	.	.	.	.	.	.	.	.	.	A	A	L	L	D	R	A	N	V	D	V	Q	L	I	G	D	S	L	G	N	V	L	Q	G	Q	A	T	T	L	P	V	T	L	D	D	.
Template Known Secondary structure										T	T					.					.	.	.	.	.	.	.	.		S				.	.	.	.	.	.	.	.	.	.	.	.							T	T		S						T	T					T	T			S	S	S	T	T						.
Template Predicted Secondary structure																.					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.									.	.	.	.	.													.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		A	A	M	A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	.	.	.	.	.	N	V	L	W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V
Query Conservation																						.	.	.	.	.
Alig confidence		.	.																			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	I	A	Y	H	T	A	C	V	A	R	A	Q	P	R	G	L	V	V	A	D	L	P	F	G	T	Y	G	T	P	A	D	A	F	A	S	A	V	K	L	.	.	.	.	.	.	.	.	.	.	.	M	R	A	G	A	Q	M	V	K	L	E	G	G	E	W	L	A	E	T	V	R	F	L	V	E	R	A	V
Template Known Secondary structure		.	.											T			S	S								T	T	S		S	S												.	.	.	.	.	.	.	.	.	.	.			T	T		S								G	G	G										T	T
Template Predicted Secondary structure		.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.												.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		K	T	L	F	N	I	V	P	E	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	.	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S
Query Conservation																																																																.
Alig confidence								.	.	.	.	.	.	.	.	.																								.	.	.	.	.																				.							.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.																								.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	C	A	H	V	.	.	.	.	.	.	.	.	.	G	L	G	A	A	Q	L	L	R	D	A	R	A	V	E	E	A	G	A	Q	L	I	V	.	.	.	.	.	L	E	A	V	P	T	L	V	A	A	E	V	T	R	E	L	S	I	P	T	I	G	I	G	A	G	.	.	.	.	.	.	.	.	.	.	A
Template Known Secondary structure								.	.	.	.	.	.	.	.	.																		T		S				.	.	.	.	.			S														S	S						S	S		.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.																								.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.										.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.						.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.											.
		231	.	.	.	.	.	.									.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.			.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.			.	.	.	.
Query Sequence		I	A	D	G	C	V	T	.	.	.	.	.	.	.	.	A	T	.	.	.	.	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V	S	Q	F	M	E	K	V	H	H
Query Conservation									.	.	.	.	.	.	.	.			.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.			.	.	.	.
Template Conservation
Template Sequence		E	C	S	G	Q	V	L	V	L	H	D	M	L	G	V	F	P	G	K	R	P	R	F	V	K	D	F	M	Q	G	Q	P	S	I	F	A	A	V	E	A	Y	V	R	A	V	K	D
Template Known Secondary structure			S	S										T	T			S	S				T	T				S	S	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions