Job Description P39364 Confidence 79.95% Date Thu Jan 5 11:59:55 GMT 2012 Rank 274 Aligned Residues 212 % Identity 12% Template c3e96B_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 bacillus clausii Resolution 1.80 Å

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		22	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		A	L	P	G	D	P	S	F	.	.	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L
Query Conservation										.	.
Alig confidence										.	.													.	.	.	.															.	.																													.
Template Conservation																								.	.	.	.															.	.																													.
Template Sequence		G	I	P	I	T	P	F	R	K	S	D	G	S	I	D	W	H	H	Y	K	E	T	.	.	.	.	V	D	R	I	V	D	N	G	I	D	V	I	V	P	.	.	C	G	N	T	S	E	F	Y	A	L	S	L	E	E	A	K	E	E	V	R	R	T	V	E	Y	V	H	G	.	R	A	L	V	V	A	G	I	G
Template Known Secondary structure								B		T	T	T			B									.	.	.	.						T	T	T						T	.	.	T	S	T	T	T	T	G	G	G	S																	T	T	.	S	S
Template Predicted Secondary structure																								.	.	.	.															.	.																													.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I	V	P	E	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S	T	V	F
Query Conservation
Alig confidence																.	.	.	.																																		.	.
Template Conservation																.	.	.	.																																		.	.
Template Sequence		Y	A	T	S	T	A	I	E	L	G	N	A	A	K	.	.	.	.	A	A	G	A	D	A	V	M	I	H	M	P	I	H	P	Y	V	T	A	G	G	V	Y	A	Y	F	R	D	I	I	E	A	L	.	.	D	F	P	S	L	V	Y	F	K	D	P	E	I	S	D	R	V	L	V	D	L	A	P	L	Q	N	L
Template Known Secondary structure		S	S													.	.	.	.			T		S										S																			.	.		S									T	T	S		T							T	T		T	T
Template Predicted Secondary structure																.	.	.	.																																		.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																				.																			.
Query SS confidence																																				.																			.
Query Sequence		N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	.	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I	.	A	D	G	C	V	T	A	T	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V	S
Query Conservation																																				.																			.
Alig confidence								.	.	.	.	.	.	.	.	.	.																			.																			.										.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.
Template Sequence		V	G	V	K	Y	A	.	.	.	.	.	.	.	.	.	.	I	N	D	L	P	R	F	A	K	V	V	R	S	I	P	E	E	H	Q	I	A	W	I	C	G	T	A	E	K	W	A	P	F	F	W	H	A	G	A	K	G	F	T	S	G	L	V	.	.	.	.	.	.	.	.	.	N	L	L	P	Q	K	A	V
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.												T	T	S		G	G	G							T	T		T	T	T								T							S	G	G	.	.	.	.	.	.	.	.	.	G	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.											170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.										.	.	.	220	.	.	.	.
		258	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	M	E	K	V	H	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	M	L	E	A	L	R	N
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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