Job Description P39364 Confidence 74.53% Date Thu Jan 5 11:59:55 GMT 2012 Rank 289 Aligned Residues 226 % Identity 11% Template c3d0cB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 oceanobacillus iheyensis at 1.9 a resolution Resolution 1.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	V	I	G	T	E	K	A	V	I	A	M	C	H	L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G
Query Conservation
Alig confidence																.	.	.	.	.	.												.	.																							.	.
Template Conservation																.	.	.	.	.	.												.	.																							.	.
Template Sequence		G	E	F	S	K	R	F	S	T	I	S	G	I	N	.	.	.	.	.	.	I	V	P	F	L	E	G	T	R	E	I	.	.	D	W	K	G	L	D	D	N	V	E	F	L	L	Q	N	G	I	E	V	I	V	P	.	.	N	G	N	T	G	E	F	Y	A	L	T	I	E	E	A	K	Q	V	A	T	R	V	T
Template Known Secondary structure					G	G	G	G	S	S						.	.	.	.	.	.				B		T	T	T			B	.	.															T	T						T	.	.	T	S	G	G	G	T	G	G	G	S
Template Predicted Secondary structure																.	.	.	.	.	.												.	.																							.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.							.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L	W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I	V	P	E	A	A	V	Y
Query Conservation
Alig confidence							.																								.	.	.	.																																			.	.
Template Conservation							.																								.	.	.	.																																			.	.
Template Sequence		E	L	V	N	G	.	R	A	T	V	V	A	G	I	G	Y	S	V	D	T	A	I	E	L	G	K	S	A	I	.	.	.	.	D	S	G	A	D	C	V	X	I	H	Q	P	V	H	P	Y	I	T	D	A	G	A	V	E	Y	Y	R	N	I	I	E	A	L	D	.	.	A	P	S	I	I	Y	F	K	D	A	H
Template Known Secondary structure					T	T	.	S	S								S	S													.	.	.	.		T	T		S										S																		S	S	.	.	S									T	T
Template Predicted Secondary structure							.																								.	.	.	.																																			.	.
Template SS confidence
		74	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		L	G	N	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I	.	A	D	G	C	V	T	A	T	T	F	K	K
Query Conservation																																																																					.
Alig confidence																							.	.	.	.	.	.	.																												.	.											.										.	.	.
Template Conservation																							.	.	.	.	.	.	.																												.	.																					.	.	.
Template Sequence		L	S	D	D	V	I	K	E	L	A	P	L	D	K	L	V	G	I	K	Y	A	.	.	.	.	.	.	.	I	N	D	I	Q	R	V	T	Q	V	X	R	A	V	P	K	S	S	N	V	A	F	I	C	G	T	A	.	.	E	K	W	A	P	F	F	Y	H	A	G	A	V	G	F	T	S	G	L	V	.	.	.
Template Known Secondary structure		S		T							T	T		T	T								.	.	.	.	.	.	.														S		G	G	G							T	T		.	.											T							S	G	G	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.																												.	.																					.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.								.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	V	F	A	N	F	V	D	Q	A	R	V	S	Q	F	M	E	K	V	H	H
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	N	V	F	P	Q	K	S	F	A	L	L	E	A	L	E	E
Template Known Secondary structure		.	.	.	.	.	.	G	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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