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Job DescriptionP39364
Confidence25.30%DateThu Jan 5 11:59:55 GMT 2012
Rank380Aligned Residues92
% Identity13%Templatec3cwoX_
PDB info PDB header:de novo proteinChain: X: PDB Molecule:beta/alpha-barrel protein based on 1thf and 1tmy; PDBTitle: a beta/alpha-barrel built by the combination of fragments2 from different folds
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   166...170.........180..... ....190.........200.........210.........220 .........230. ........240..
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Query Sequence  GNRDICSIAKSTVFNNHPDA. LCVSGLTAGTRTDSALLKRVKETVPDTVVLANTGV. CLENVEEQLSI. ADGCVTATTFK
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Template Sequence  TGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVF.
Template Known Secondary structure  T
STTTTT

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GGG

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   128.130.........140.........150.........160.........170.........180.........190.........200......
 
   243......250.........260..
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Query Sequence  KDGVFANFVDQARVSQFMEK
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Template Sequence  . . . . HFREIDVRELKEYLKK
Template Known Secondary structure  ....TTSS
T
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   207..210.........220..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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