Job Description P39364 Confidence 96.15% Date Thu Jan 5 11:59:55 GMT 2012 Rank 143 Aligned Residues 194 % Identity 9% Template c3cu2A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution Resolution 1.91 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	.	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L	W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F
Query Conservation																													.
Alig confidence																													.							.	.	.	.	.	.	.																		.																		.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.																		.																		.	.	.	.
Template Sequence		N	E	E	V	T	T	L	L	E	N	Q	I	N	V	L	H	F	D	I	A	D	G	Q	F	S	S	L	F	T	V	G	A	I	G	.	.	.	.	.	.	.	I	K	Y	F	P	T	H	C	F	K	D	V	H	L	X	V	R	.	N	Q	L	E	V	A	K	A	V	V	A	N	G	A	N	L	V	.	.	.	.
Template Known Secondary structure											T	T										B	S	S	S	S	S		B		B		T			.	.	.	.	.	.	.			T	S		T	T	S									S	.												T	T		S			.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.																		.																		.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.								.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I	V	P	E	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence		.																																						.	.															.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation		.																																						.	.															.	.	.	.	.	.
Template Sequence		.	T	L	Q	L	E	Q	Y	H	D	F	A	L	T	I	E	W	L	A	K	Q	K	T	T	Y	A	N	Q	V	Y	P	V	L	I	G	A	C	L	.	.	C	P	E	T	P	I	S	E	L	E	P	Y	L	D	.	.	.	.	.	.	Q	I	D	V	I	Q	L	L	T	L	D	P	R	N	G	T	K	Y	P	S
Template Known Secondary structure		.				T	T		T	T	S									T	T						T	T												.	.		T	T	S		G	G	G	G	T	T	T	T	T	.	.	.	.	.	.	T		S						S			T	T	T	T
Template Predicted Secondary structure		.																																						.	.															.	.	.	.	.	.
Template SS confidence
			96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.					.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																		.	.	.	.																						.	.	.
Query SS confidence																		.	.	.	.																						.	.	.
Query Sequence		R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	.	.	.	.	T	V	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I	A	.	.	.	D	G	C	V	T	A	T	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V	S	Q	F	M	E	K	V
Query Conservation																		.	.	.	.																						.	.	.
Alig confidence																		.	.	.	.																						.	.	.																		.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.
Template Sequence		E	L	I	L	D	R	V	I	Q	V	E	K	R	L	G	N	R	R	V	E	K	L	I	N	I	D	G	S	X	T	L	E	L	A	K	Y	F	K	Q	G	T	H	Q	I	D	W	L	V	S	G	S	A	L	F	S	G	E	L	K	T	N	.	.	.	.	.	.	L	K	V	W	K	S	S	I
Template Known Secondary structure																G	G	G	G	G	G							S	S												S	S	S									G	G	G	G	S	S						.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.							.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions