Job Description P39364 Confidence 54.85% Date Thu Jan 5 11:59:55 GMT 2012 Rank 339 Aligned Residues 231 % Identity 13% Template c2w9mB_ PDB info PDB header:dna replication Chain: B: PDB Molecule:polymerase x; PDBTitle: structure of family x dna polymerase from deinococcus2 radiodurans Resolution 2.46 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.
Predicted Secondary structure																																																								.																							.
Query SS confidence																																																								.																							.
Query Sequence		V	I	A	M	C	H	L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	.	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	.	I	R
Query Conservation																																																								.																							.
Alig confidence									.	.	.	.																			.	.	.	.	.	.	.																			.																							.
Template Conservation									.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		L	R	G	M	I	H	T	.	.	.	.	H	S	T	W	S	D	G	G	A	S	I	R	E	M	A	E	A	T	.	.	.	.	.	.	.	L	T	L	G	H	E	F	L	G	T	A	D	H	S	R	A	A	Y	Y	A	N	G	L	T	I	E	R	L	R	E	Q	L	K	E	I	R	E	L	Q	R	A	G	L	P
Template Known Secondary structure									.	.	.	.			T	T	T	T		S	S										.	.	.	.	.	.	.			T	T		S								B	T	T		G	G	G	T		B																		T	T
Template Predicted Secondary structure									.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.					.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.								.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.																														.	.
Query SS confidence																																							.																														.	.
Query Sequence		I	P	F	G	V	N	V	L	W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	.	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I	.	.	V	P	E	A	A	V	Y	L	G	N	R
Query Conservation																																							.																														.	.
Alig confidence																			.	.	.	.	.																.																														.	.
Template Conservation																			.	.	.	.	.
Template Sequence		I	V	A	G	S	E	V	D	I	L	D	D	G	S	L	D	F	.	.	.	.	.	P	D	D	V	L	G	E	L	D	Y	V	V	V	S	V	H	S	N	F	T	L	D	A	A	R	Q	T	E	R	L	I	R	A	V	S	H	P	L	V	T	V	L	G	H	A	T	G	R	L	L	L	R	R	P	G	Y	A	L
Template Known Secondary structure										B		T	T	S		B	S	S	.	.	.	.	.						T	T	S	S								S		T	T	S														T		S	S						S	T	T			B	T	T	T	B
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.						.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	.	C	L	E	N	V	E	E	Q	L	S	I	A	D	G	C	V	T	A	T	T	F	K	K	D	G	V	F
Query Conservation																																																						.
Alig confidence															.	.																									.	.	.											.														.	.
Template Conservation															.	.																									.	.	.																									.	.
Template Sequence		D	L	D	A	V	L	G	A	C	E	A	N	G	.	.	T	V	V	E	I	N	A	N	A	A	R	L	D	L	D	W	R	E	A	L	R	W	R	E	.	.	.	R	L	K	F	A	I	N	T	D	A	H	V	P	G	G	L	R	D	A	R	Y	G	V	M	.	.	Q	A	R	K	A	G	L	T	P	A	H	V
Template Known Secondary structure														T	.	.								S	T	T	T		B	S									T	T	.	.	.	T										S	S	G	G	G	G	G	G							.	.					T	T			G	G	G	B
Template Predicted Secondary structure															.	.																									.	.	.																									.	.
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.			.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.				.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.			.	.	.	.	.	.	.	.	540	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	F	V	D	Q	A	R	V	S	Q	F	M	E	K	V	H	H	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	S	L	G	R	A	E	F	L	D	F	V	A	R	Q	R	A	A	R
Template Known Secondary structure		G	G	G	S															T
Template Predicted Secondary structure
Template SS confidence
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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