Job Description P39364 Confidence 86.55% Date Thu Jan 5 11:59:55 GMT 2012 Rank 248 Aligned Residues 190 % Identity 13% Template c2vwtA_ PDB info PDB header:lyase Chain: A: PDB Molecule:yfau, 2-keto-3-deoxy sugar aldolase; PDBTitle: crystal structure of yfau, a metal ion dependent class ii2 aldolase from escherichia coli k12 - mg-pyruvate product3 complex Resolution 1.93 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	L	K	E	V	I	G	T	E	K	A	V	I	A	M	C	H	L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R
Query Conservation
Alig confidence																		.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Conservation																		.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Sequence		N	P	F	K	E	R	L	R	K	G	E	V	Q	I	G	L	.	.	.	.	.	W	L	S	S	T	T	A	Y	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	D	G	E	H	.	.	.	.	.	A	P	N	T	I	Q	D	L	Y	H	Q	L	Q
Template Known Secondary structure										T	T							.	.	.	.	.				S						.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T			S						T	T	T	.	.	.	.	.	S
Template Predicted Secondary structure																		.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.															.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L	W	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	.	.	.	.	A	P	Y	A	S	Q	P	V	I	R	P	V	E	G	S	K	P	L	I	K	Q	V	L	D	I	G	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	L	I	P	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A
Template Known Secondary structure				.	.	.	.	T	T	S	S	S							S	S												T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.					S				S												S		T	T	T					S		G
Template Predicted Secondary structure				.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		63	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.															.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
																				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.											.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	K	T	L	F	N	I	V	P	E	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	.	.	.	.	.	.	.	.	.	.	S	G	L	T	A	G	T	R	T	D	S	A	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.																								.	.	.	.							.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.																								.	.	.	.
Template Sequence		S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	.	.	C	L	L	V	Q	V	E	S	K	T	A	L	D	N	L	D	E	I	L	D	V	E	G	.	.	.	.	I	D	G	V	F	I	G	P	A	D	L	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	V	Q	R	I
Template Known Secondary structure		G	G	S	G	G	G	G	G	G	T	S	T	T										.	.								S						T						T	S	T	T	.	.	.	.															T	T		T	T		T	T	S
Template Predicted Secondary structure																								.	.																								.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																					.												.
Query SS confidence																					.												.
Query Sequence		L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	.	C	L	E	N	V	E	E	Q	L	S	I	.	A	D	G	C	V	T	A	T
Query Conservation																					.												.
Alig confidence																					.												.
Template Conservation
Template Sequence		I	E	T	S	I	R	R	I	R	A	A	G	K	A	A	G	F	L	A	V	A	P	D	M	A	Q	Q	C	L	A	W	G	A	N	F	V	A	V	G	V
Template Known Secondary structure												T	T								S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions