Job Description P39364 Confidence 66.92% Date Thu Jan 5 11:59:55 GMT 2012 Rank 307 Aligned Residues 208 % Identity 13% Template c2vc6A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of mosa from s. meliloti with pyruvate bound Resolution 1.95 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	I	R	I	P	F	G	V	N	V	L	W	.	D	P	V	A
Query Conservation																																																																													.
Alig confidence																		.	.	.	.															.	.																													.											.
Template Conservation																		.	.	.	.															.	.																													.
Template Sequence		T	P	F	A	D	D	R	I	D	E	V	A	L	H	D	L	.	.	.	.	V	E	W	Q	I	E	E	G	S	F	G	L	V	P	.	.	C	G	T	T	G	E	S	P	T	L	S	K	S	E	H	E	Q	V	V	E	I	T	I	K	T	A	N	G	.	R	V	P	V	I	A	G	A	G	S	N	S	T	A	E
Template Known Secondary structure						T	T											.	.	.	.							T	T		S				T	.	.	T	S	G	G	G	T	G	G	G	S																	T	T	.	S	S		B							S	S
Template Predicted Secondary structure																		.	.	.	.															.	.																													.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																												.														.
Query SS confidence																																												.														.
Query Sequence		S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	.	G	A	G	E	V	K	T	L	F	N	I	V	P	.	E	A	A	V	Y	L	G	N	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H
Query Conservation																																												.														.
Alig confidence											.	.	.	.																														.														.
Template Conservation											.	.	.	.
Template Sequence		A	I	A	F	V	R	H	A	Q	.	.	.	.	N	A	G	A	D	G	V	L	I	V	S	P	Y	Y	N	K	P	T	Q	E	G	I	Y	Q	H	F	K	A	I	D	A	A	S	T	I	P	I	I	V	Y	N	I	P	G	R	S	A	I	E	I	H	V	E	T	L	A	R	I	F	E	D	C	P	N	V	K	G
Template Known Secondary structure											.	.	.	.		T	T		S									S	S																			S	S												S																T	T
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	P	D	T	V	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I	.	A	D	G	C	V	T	A	T	T	F	K	K	D	G	V	F	A	N	F	V	D	Q	A	R	V	S	Q	F	M	E
Query Conservation																																																			.
Alig confidence					.	.	.	.	.	.	.	.	.																										.	.	.										.										.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.																										.	.	.																				.	.	.	.	.	.	.	.	.
Template Sequence		V	D	A	.	.	.	.	.	.	.	.	.	T	G	N	L	L	R	P	S	L	E	R	M	A	C	G	E	D	F	N	L	L	T	G	E	D	.	.	.	G	T	A	L	G	Y	M	A	H	G	G	H	G	C	I	S	V	T	A	.	.	.	.	.	.	.	.	.	N	V	A	P	A	L	C	A	D	F	Q	Q
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	S			T										S		T	T	S	B				S		G	.	.	.	G	G							T	T							S	G	G	.	.	.	.	.	.	.	.	.	G	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.																										.	.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.										.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.										.	.	.	210	.	.	.	.	.	.	.	.
		262	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	H	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	C	L	N
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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