Job Description P39364 Confidence 98.65% Date Thu Jan 5 11:59:55 GMT 2012 Rank 55 Aligned Residues 197 % Identity 18% Template c2v82A_ PDB info PDB header:lyase Chain: A: PDB Molecule:2-dehydro-3-deoxy-6-phosphogalactonate aldolase; PDBTitle: kdpgal complexed to kdpgal Resolution 2.1 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	T	E	K	A	V	I	A	M	C	H	L	R	A	L	P	G	D	P	S	F	D	A	Q	L	G	M	N	W	V	I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.															.	.	.	.	.	.											.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.															.	.	.	.	.	.											.	.	.	.	.	.	.
Template Sequence		W	Q	T	K	L	P	L	I	A	I	L	.	.	.	.	.	.	.	.	.	.	.	.	R	G	I	T	P	D	E	A	L	A	H	.	.	.	.	V	G	A	V	I	D	A	G	F	D	A	V	E	I	.	.	.	.	.	.	P	L	N	S	P	Q	W	E	Q	S	.	.	.	.	.	.	.	I	P	A	I	V
Template Known Secondary structure				S	S	S							.	.	.	.	.	.	.	.	.	.	.	.	T	T										.	.	.	.								T							.	.	.	.	.	.		T	T	S	T	T					.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.															.	.	.	.	.	.											.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.													.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.							.	40	.	.	.	.	.	.	.	.								.	50	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		S	D	I	R	I	P	F	G	V	N	V	L	W	.	D	P	V	A	S	F	D	L	A	M	A	T	G	A	K	F	I	R	E	I	F	T	G	A	Y	A	S	D	F	G	V	W	D	T	N	V	G	E	T	I	R	H	Q	H	R	I	G	A	G	E	V	K	T	L	F	N	I	V	P	E	A	A	V	Y	L	G
Query Conservation															.
Alig confidence															.																		.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K	P	E	Q	V	D	A	L	A	R	X	G	C	Q	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	P	N	I	H	S	E	V	I	R	R	A	V	G	Y	.	.	.	.	.	.	.	.	.	G	X	T	V	C	P	G	C	A	T	A
Template Known Secondary structure					T	T	T	S									S										T	T					.	.	.	.	.	.	.	.	.	.	.	.	.			S	S												T	.	.	.	.	.	.	.	.	.	T									S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.														.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100										.	.	.	.	.	.	.	.	.	110	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																													.																							.
Query SS confidence																																													.																							.
Query Sequence		N	R	D	I	C	S	I	A	K	S	T	V	F	N	N	H	P	D	A	L	C	V	S	G	L	T	A	G	T	R	T	D	S	A	L	L	K	R	V	K	E	T	V	.	P	D	T	V	V	L	A	N	T	G	V	C	L	E	N	V	E	E	Q	L	S	I	.	A	D	G	C	V	T	A	T	T	F	K	K	D
Query Conservation																																													.																							.
Alig confidence				.	.	.	.	.									.							.	.	.																			.																							.
Template Conservation				.	.	.	.	.									.							.	.	.
Template Sequence		T	E	.	.	.	.	.	A	F	T	A	L	E	A	G	.	A	Q	A	L	K	I	.	.	.	F	P	S	S	A	F	G	P	Q	Y	I	K	A	L	K	A	V	L	P	S	D	I	A	V	F	A	V	G	G	V	T	P	E	N	L	A	Q	W	I	D	A	G	C	A	G	A	G	L	G	S	D	L	Y	R	A
Template Known Secondary structure				.	.	.	.	.							T	T	.		S					.	.	.	T	T														T	T	S		T	T							S	S			T	T	T								T		S						T	T	T			T
Template Predicted Secondary structure				.	.	.	.	.									.							.	.	.
Template SS confidence
		112	.						.	.	.	.	.	.	120	.		.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	F	A	N	F	V	D	Q	A	R	V	S	Q	F	M	E	K	V	H	H
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		G	Q	S	V	E	R	T	.	A	Q	Q	A	A	A	F	V	K	A	Y	R	E
Template Known Secondary structure		T							.
Template Predicted Secondary structure									.
Template SS confidence
		183	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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