Job Description P39364 Confidence 92.45% Date Thu Jan 5 11:59:55 GMT 2012 Rank 207 Aligned Residues 77 % Identity 14% Template c2cw6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:hydroxymethylglutaryl-coa lyase, mitochondrial; PDBTitle: crystal structure of human hmg-coa lyase: insights into2 catalysis and the molecular basis for3 hydroxymethylglutaric aciduria Resolution 2.10 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																																						.												.	.	.
Query SS confidence																																																						.												.	.	.
Query Sequence		I	D	K	A	W	D	D	L	M	A	L	Q	N	G	G	V	D	A	V	M	F	S	N	E	F	S	L	P	Y	L	T	K	V	R	P	E	T	T	A	A	M	A	R	I	I	G	Q	L	M	S	D	I	.	R	I	P	F	G	V	N	V	L	W	D	.	.	.	P	V	A	S	F	D	L	A	M	A	T	G	A
Query Conservation																																																						.												.	.	.
Alig confidence																							.	.	.	.	.	.	.	.																								.												.	.	.
Template Conservation																							.	.	.	.	.	.	.	.
Template Sequence		P	A	K	V	A	E	V	T	K	K	F	Y	S	M	G	C	Y	E	I	S	L	.	.	.	.	.	.	.	.	G	D	T	I	G	V	G	T	P	G	I	M	K	D	M	L	S	A	V	M	Q	E	V	P	L	A	A	L	A	V	H	C	H	D	T	Y	G	Q	A	L	A	N	T	L	M	A	L	Q	M	G	V
Template Known Secondary structure															T	T		S					.	.	.	.	.	.	.	.			T	T																			S		G	G	G						B		T	T	S												T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.									.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		115	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	I	R	E	I	F	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	V	D	S	S	V	A	G
Template Known Secondary structure							B	T	T	S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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